Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00812 ATGGCATCGCTTACCTCTCTGTCTTCTTCTCCTTTTCTTCAACTAGAATTTCCATTAAAGACCAAGAGATCCTCCTCCATGCGTTCTTTTTCTGTTAATCCAATCAAAGCCTCAATCTCAGAGTCAGAGGCACCATCATTATCAGTTTCACCTGAGACCAAAAACCTTCCAATGCGCAAAATCCCCGGAGATTATGGTTTCCCTTTTATAGGTCCCATTCAAGACCGTCTCGATTATTTCTACAACCAAGGCCGTGACAAGTACTTCCAATCCCGAATCCACAAGTACCAGTCAACCGTTTTTCGCGCCAACATGCCACCAGGTCCTTTTGTTTCCTCTAACCCAAACGTCGTCGTTTTGCTCGATGGTAAAAGCTTCCCTGTCCTCTTCGACGTGACCAAAGTCGAAAAGAGAGACCTCTTCACCGGAACCTTCATGCCTTCCACTGAACTCACCGGCGGTTACCGTATCCTCTCCTACCTCGATCCATCCGAGCCAAAACACGAGCAACTCAAACGCCTCATGTTCTTCCTCCTCAAATCTGGCAGCAGTAAAATCATCCCTGAGTTCCATTCAAGCTACACACAACTCTTTGACACCTTGGAGAAAGAGCTCGCTGCTAAAGGAAAAGCGAATTTCGGAGATGCTAATGATCAAGCAGCATTTAACTTCCTTGCTCGTTCTCTTTACGGCACTAACCCTTCCGATACAAAGCTCGGACGTGAAGGTCCTGCAATAGTGCAGAAATGGGTTCTGTTTCAACTCAGTCCTATTCTTATCTTGGGACTTCCACCGCTTCTAGAAGATTCTATTTTCCACACGTTCCGTCTCCCTCCGTTTTTGATAAAGAAAGATTACCAGAAACTATACAATTTCTTCTATGAATCCTCTGGTCCTGTGCTTGACGAAGCGGTGCGTCTTGGCGTGTCTAAAGAAGAAGCTTGTCATAATCTGCTATTTGCCACGTGTTTTAATTCGTTTGGTGGCATGAAGATTTTTTTCCCAAACACGCTGAAATGGATTGGACGTGCTGGGGTGAAGCTTCACACTCGTTTAGCGGAGGAGATTAGGTCTGCCGTTAAATCTAACGGCGGAAAGGTGACTATGGCGGCGATGGAAATGATGCCGTTGATGAAATCTGTGGTTTATGAAGCGCTTCGAATTGAGCCCCCAGTGCCGTTGCAGTATGGGAAGGCGAAGAGGGATTTGGTTATTGAGAACCATGAGAATGCTTTTGAAGTGAAAGAAGGGGAAATGTTGTTTGGGTTTCAACCGTTTGCGACTAAGGATCCTAAGATATTTGAGAGAGCGGAAGAGTTTGTTGGGGATAGGTTCATGGGGGAAGGGGAGAAGTTGTTGAAGCATGTGCTTTGGTCGAATGGTCCTGAGACGGAGCAACCAACCGTTGGTAACAAGCAATGTGCTGGGAAGGATTTCGTGGTGTTGGTTTCTAGACTTCTGGTGGTGGAACTGTTTCTCCGTTATGATTCGTTTGACATTCAAGTGGGAAAGTCGCCGTTGGGATCTTCCGTCACCATCACCTCTCTCAAGAGGGCAAGCTTTTAA 1566 0.4617 MASLTSLSSSPFLQLEFPLKTKRSSSMRSFSVNPIKASISESEAPSLSVSPETKNLPMRKIPGDYGFPFIGPIQDRLDYFYNQGRDKYFQSRIHKYQSTVFRANMPPGPFVSSNPNVVVLLDGKSFPVLFDVTKVEKRDLFTGTFMPSTELTGGYRILSYLDPSEPKHEQLKRLMFFLLKSGSSKIIPEFHSSYTQLFDTLEKELAAKGKANFGDANDQAAFNFLARSLYGTNPSDTKLGREGPAIVQKWVLFQLSPILILGLPPLLEDSIFHTFRLPPFLIKKDYQKLYNFFYESSGPVLDEAVRLGVSKEEACHNLLFATCFNSFGGMKIFFPNTLKWIGRAGVKLHTRLAEEIRSAVKSNGGKVTMAAMEMMPLMKSVVYEALRIEPPVPLQYGKAKRDLVIENHENAFEVKEGEMLFGFQPFATKDPKIFERAEEFVGDRFMGEGEKLLKHVLWSNGPETEQPTVGNKQCAGKDFVVLVSRLLVVELFLRYDSFDIQVGKSPLGSSVTITSLKRASF. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00812 521 FunFam Allene oxide synthase, chloroplastic 56 521 - -
Seca3g00812 521 SUPERFAMILY Cytochrome P450 57 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g00812 521 PRINTS E-class P450 group IV signature 428 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g00812 521 PRINTS E-class P450 group IV signature 375 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g00812 521 PRINTS E-class P450 group IV signature 474 492 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g00812 521 Pfam Cytochrome P450 350 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g00812 521 CDD CYP74 90 514 - -
Seca3g00812 521 Gene3D Cytochrome P450 52 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g00812 521 PANTHER CYTOCHROME P450 26 56 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00812 Seca-Chr3 13491523 13493088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00812 1 521 Cytochrome P450 AT5G42650 66.350 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00812 K01723 - gmx:100807192 813.913