Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00746 ATGGCTATCGCAACAGAGACTCAGCCTCAACCTCAACAACACACGGCTTATTCTGAGGTTTCAGGTTCAGCTGCGGAGCAAAGAAGGTGGACGCTTAATGATTTTGATATCGGAAAACCTCTTGGAAGGGGAAAATTCGGTCATGTCTATTTGGCCAGAGAAAAGAGAAGTAATCACATCGTTGCTCTGAAAGTACTCTTTAAGAGCCAGCTGCAACAATCCCAAGTTGAGCATCAGCTTCGGCGAGAAGTTGAAATACAGAGTCATCTTCGACATCCCCATATCTTACGCCTTTATGGGTACTTTTATGATCAGAAAAGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTCTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTTGCATCATTGGCCCGAGCTCTTATATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCAGAGAACCTTCTTATTGGTGCCCAGGGTGAACTGAAGATAGCTGACTTTGGGTGGTCGGTGCACACATTCAATCGCAGGCGGACCATGTGTGGTACACTGGATTACCTTCCTCCTGAGATGGGTATGTTCACATGA 618 0.4337 MAIATETQPQPQQHTAYSEVSGSAAEQRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMGMFT. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00746 205 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Seca3g00746 205 SUPERFAMILY Protein kinase-like (PK-like) 20 201 IPR011009 -
Seca3g00746 205 Gene3D Phosphorylase Kinase; domain 1 22 117 - -
Seca3g00746 205 SMART serkin_6 35 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00746 205 FunFam Aurora kinase A 27 118 - -
Seca3g00746 205 ProSiteProfiles Protein kinase domain profile. 35 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00746 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Seca3g00746 205 FunFam Aurora kinase B 118 205 - -
Seca3g00746 205 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 201 IPR030616 GO:0004672
Seca3g00746 205 MobiDBLite consensus disorder prediction 1 22 - -
Seca3g00746 205 CDD STKc_Aurora 34 201 - -
Seca3g00746 205 Pfam Protein kinase domain 37 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00746 205 Gene3D Transferase(Phosphotransferase) domain 1 118 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00746 Seca-Chr3 12010970 12012854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00746 35 201 CBL-interacting serine-threonine protein kinases AT4G24400 37.059 1.64e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Seca3g00746 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00746 K08850 - gmx:100803678 399.823