Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00745 ATGACGCACCACTGTATTTTTTCTAAAATTTTTGAGGTTTCAACAGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCCTTTGCTATGAATTTCTTTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGATACTTACAGGAGGATAGTACAAGTGGATCTCAAGTTCCCTCCTAAACCAATTGTGTCTTCTGCTGCAAAGGACCTCATCAGTCAGATGCTGGTTAAGGATTCCTCTCAACGTCTACCGTTGCACAAGCTACTTGAACACCCTTGGATTGTTCAGAATGCGGAGCCATCCGGTGTATATAGGGGCTAG 339 0.4366 MTHHCIFSKIFEVSTVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYRG. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00745 112 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00745 112 SUPERFAMILY Protein kinase-like (PK-like) 17 103 IPR011009 -
Seca3g00745 112 Gene3D Transferase(Phosphotransferase) domain 1 11 109 - -
Seca3g00745 112 Pfam Protein kinase domain 17 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00745 112 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 17 111 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00745 Seca-Chr3 12010015 12010932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00745 20 109 EF-hand Containing Proteins AT5G19360 41.304 6.94e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Seca3g00745 Pkinase 3.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00745 K08850 - qsu:112003432 200.675