Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00707 ATGCAACGACGATGGCCGCCACAGGGAAGTGTCGGGAGGAAGACAGGACGCGATGGTTGGCTATGGTGTTCGAGGTGGTTCGATCTGGAGTGGCGGGGAATGGGCGTGCGCGGTGGACATGGATGGAAGGTGGTCGCGCGCGACAACCAGCCAACAGCTATGCGGCGAGAGGTTACAACAGGGGTGCCACGAGTTGCAGCTGCGGTGGCCATGGCAAAGTGCTCTACCGCACGATCTGGACGAGAAAAAGGTCCTCAAATTGAAGTTATTCGATTATCAACAAAATTAATTGAAATGGAGATCAATTCTGTGAATGAAAACCTTTTGATTGATGTATCAAGGAACAAAGCTTTACATGGTGGCAATTTTCAGGGCACCCCAGTAGGGGTTTCTATGGACAACACAAGATTAGCTTTGGCTGCCATTGGAAAACTCCTTTTTGCTCAAATGTTTAAGTTGGTTAATGATTTCTATAATAATGGTTTGCCTTCAAATCTCTCTGGAGGTGCTTTAGGAGGTGCTTTCTCTTTGGGTTTTACCCTAAAGTTGTTTGCATTTAGGAGATTAATTCAAGCACCAAAGTCCTCCAGTCCTCCAGTCCTCGTTTTCAATCTCTCCTCTGGAGGCTTCGACTTCGTTATTGCTCCTCTGGTTCGTTTGTTTACCTGCCTTACAGGAAATTATGTAATGGTAGAAGTAGAAAGAGAGATGATGAAAAGTTGTTTGAGTTGGCTTATGATGGTGGCATCGGCTGTTTAA 759 0.4611 MQRRWPPQGSVGRKTGRDGWLWCSRWFDLEWRGMGVRGGHGWKVVARDNQPTAMRREVTTGVPRVAAAVAMAKCSTARSGREKGPQIEVIRLSTKLIEMEINSVNENLLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMFKLVNDFYNNGLPSNLSGGALGGAFSLGFTLKLFAFRRLIQAPKSSSPPVLVFNLSSGGFDFVIAPLVRLFTCLTGNYVMVEVEREMMKSCLSWLMMVASAV. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00707 252 PANTHER HISTIDINE AMMONIA-LYASE 84 169 IPR001106 -
Seca3g00707 252 SUPERFAMILY L-aspartase-like 84 194 IPR008948 GO:0003824
Seca3g00707 252 Pfam Aromatic amino acid lyase 84 205 IPR001106 -
Seca3g00707 252 Gene3D Fumarase/aspartase (Central domain) 83 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00707 Seca-Chr3 11082435 11084873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00707 84 169 Monolignol Biosynthesis Gene Families AT5G04230 83.721 7.14e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00707 K10775 - han:110925465 130.568