Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00674 ATGAACAAATTACCAAATTTTACGCAAAATAACAGAGTAAATCCACTTGAATTGTGGATTTATCTTTCAGCTCTCCCTCAATCCCAGTTATTTAGTGCAAAAGGATCGGAGTGGTTTAAAGTAGCAGAAGCTACTGCTGCAGAAAAGCTAGCCCAACCAGAGCAAAATTTGTTTGACTGGCTCAAAAATGACAACCGAAGATTTCTCCATGTCGTATACCGTGTTGGAGACTTGGAGAAGACTATAAAGTTCTACACTGAATGTCTTGGAATGAAGCTATTGAGAAAACGTGACATTCCAGAAGATAGATATACAAACGCTTTTCTTGGATATGGGCCTGAAGATTCCAATTTTACTGTTGAACTTACTTACAATTATGGGATGGATAACTATGGCATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTGAAGATGTTGCCAAAACAGTAGATCTAATAAAAGCAAAAGGGGGAAAGGTTACCAGGGAAGCAGGGCCTGTCAAAGGTGACACTACAGTAACTGCTTCCATTGAAGATCCTGATGGTTATAAGTTTGAGCTTTTGGAGGGAAGACTTACTCCTGAACCCTTATGCCAAGTGATGCTTCGAGTTGGTGATCTTGATCGTGCCGTGGCCTTCTATCAAAAAGCTCTTGGAATGAAACTTCTCAGCAAGAGGGACAACCCTGAGCAAAAGTACACAGAAGCCGTGATGGGCTATGGACCTGAAGCTAATAATCCTGTTCTAAAGCTGACATATAACTATGGTGTTACTAATTATGACAAAGGAAATGGTTATCAACAGATTGCAATAGGCACAAATGATGTCTATAAGACTGCTGAGGCAATCAAATTGTGTGGAGGGAAGATTATCCGTGAACCTGGGCCCTTGCCAGGTATCAACACCAAGATCGTGGTTTGCTTGGACCCTGATGGCTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 990 0.4061 MNKLPNFTQNNRVNPLELWIYLSALPQSQLFSAKGSEWFKVAEATAAEKLAQPEQNLFDWLKNDNRRFLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSNFTVELTYNYGMDNYGIGTGFGHFGIVAEDVAKTVDLIKAKGGKVTREAGPVKGDTTVTASIEDPDGYKFELLEGRLTPEPLCQVMLRVGDLDRAVAFYQKALGMKLLSKRDNPEQKYTEAVMGYGPEANNPVLKLTYNYGVTNYDKGNGYQQIAIGTNDVYKTAEAIKLCGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00674 329 ProSitePatterns Glyoxalase I signature 1. 70 91 IPR018146 GO:0004462|GO:0046872
Seca3g00674 329 Gene3D - 194 329 IPR029068 -
Seca3g00674 329 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 197 321 IPR037523 -
Seca3g00674 329 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 198 321 IPR029068 -
Seca3g00674 329 Gene3D - 39 191 IPR029068 -
Seca3g00674 329 CDD GlxI_Ni 69 189 - -
Seca3g00674 329 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 66 191 IPR029068 -
Seca3g00674 329 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 67 191 IPR037523 -
Seca3g00674 329 PANTHER LACTOYLGLUTATHIONE LYASE 49 329 - -
Seca3g00674 329 FunFam Lactoylglutathione lyase 194 329 - -
Seca3g00674 329 ProSitePatterns Glyoxalase I signature 1. 200 221 IPR018146 GO:0004462|GO:0046872
Seca3g00674 329 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 68 188 IPR004360 -
Seca3g00674 329 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 200 317 IPR004360 -
Seca3g00674 329 NCBIfam lactoylglutathione lyase 68 190 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00674 Seca-Chr3 10540661 10545569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00674 200 320 Calmodulin-binding Proteins AT1G08110 26.027 1.78e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00674 K01759 - gmx:100810908 541.576