LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g00662	ATGAAAACCCATCAACCAAAGCTGAAAACCCAACTATTCTCATGTGGCTTCTTTCGCCATTGCGCTCAAAGCGTCCTTAGCCCCACTGCTACAAGTAGTGCCACACCACCACTCCCTCTCACACCTCATCACACCACAACCCCTCAATTCAAACCAGATCAATGCGAATCCTCCACCTCTTCCTCTTCTTCCAACACTTCTCAAAGCTTCACACAATGGAGGTTCTCTCTCCCCACTCCCACCCCCAACACCATCATCACAAACCCTGATCCTCCCCTTCCTCTTTCACCTTCCCCTTACCCTTCACCTTTCACCATTCCCAACCTCCAAGAACTCTTCCACGTGTCAGAACTCCAACTCAGCACCGACCCTAACGGTGCCCTTCAGCTTCTAGAACGTTCCTTAGTTCCCAACCCGCCGCAAGAGCAGCCACCGTGTCCTCCTAACCTCATGCGAGCCCTAATCGCGAATCTCAGAGAGGCCAAGCCCGCTACCAAGATACTCTTCGCTCTTTGCTTGTCGGAGGCTAACCGCCGCGTCGCCGTTGAATCTGGTGCCGTCGGAGCCGTCGTGGAGTCGGCGCTGGAGCTTGATGGCTCGCCGGCGGAGAGGGCTCTGGCCGCGCTTGAGCTCATGTGTACGGTGGCGGAGGGGGCGGAGGAGGTGAGGGTTCACGCGCTGGCGGTGCCGGTGATGGTCACCATGATGGGGAAGACGGGGGCGCGTGGGAAGGAGTATGCCATCGGGGTGCTGGCGGTGATATACGGTGGTGCTGTGGCGGAGCAGCAGACGGCTCCGCCGGAAGAGGTGGCGCGTGCGGTGGAATTGGCACTGCAAGGAGAGTGCAGCGCGAGAGGGAGAAGAAAGGGCGGGCAATTGTTGAAGACGCTGCAACTCCTCTCTCACCCTCCCCAGTCCCACACTCTTACTTGA	933	0.5809	MKTHQPKLKTQLFSCGFFRHCAQSVLSPTATSSATPPLPLTPHHTTTPQFKPDQCESSTSSSSSNTSQSFTQWRFSLPTPTPNTIITNPDPPLPLSPSPYPSPFTIPNLQELFHVSELQLSTDPNGALQLLERSLVPNPPQEQPPCPPNLMRALIANLREAKPATKILFALCLSEANRRVAVESGAVGAVVESALELDGSPAERALAALELMCTVAEGAEEVRVHALAVPVMVTMMGKTGARGKEYAIGVLAVIYGGAVAEQQTAPPEEVARAVELALQGECSARGRRKGGQLLKTLQLLSHPPQSHTLT.	311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g00662	310	MobiDBLite	consensus disorder prediction	28	83	-	-
	Seca3g00662	310	Gene3D	-	123	304	IPR011989	-
	Seca3g00662	310	PANTHER	ARM REPEAT SUPERFAMILY PROTEIN	1	301	-	-
	Seca3g00662	310	MobiDBLite	consensus disorder prediction	28	93	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g00662	Seca-Chr3	10379323	10380255	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca3g00662	149	298	U-box Gene Family	AT1G49780	33.113	1.18e-16	78.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g00662	-		-	gmx:100814020	354.369