Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00610 ATGACTGCTACATTTGATTCTCAGTCATCACTTTGTGTTGGCAGCCCAGTTTCAGCTAACAAACCAAACACCAGCAGAGAGAATCATACCAAAGGAGCTACAAGTGGTTCCTCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAGAGCACAGATCTAGTTGATGTGAAGCGCCTTAGAAGGAAGGCATCTAATCGTGACTCTGCTAGGAGGTCAAGAAAAAGAAAACAAGAGCATTTGGCTGAACTTGAGACACAGGCGGAAAAATTGAAACGGGAAAATGAAACCCTGTACAAGCAGTTTACGGATGCTAGTCAACTATTTCGTAATGCTGATACGGATAACCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTACGAGGTTCTTCTGGTAACATTATTCTACAGTTATAA 423 0.4232 MTATFDSQSSLCVGSPVSANKPNTSRENHTKGATSGSSDEDDEAGPCEQSTDLVDVKRLRRKASNRDSARRSRKRKQEHLAELETQAEKLKRENETLYKQFTDASQLFRNADTDNRVLKSDVEALRAKVRGSSGNIILQL. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00610 140 CDD bZIP_plant_GBF1 58 109 IPR045314 GO:0003700|GO:0006355
Seca3g00610 140 Gene3D - 56 114 - -
Seca3g00610 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 100 IPR004827 GO:0003700|GO:0006355
Seca3g00610 140 SMART brlzneu 53 117 IPR004827 GO:0003700|GO:0006355
Seca3g00610 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Seca3g00610 140 MobiDBLite consensus disorder prediction 1 80 - -
Seca3g00610 140 MobiDBLite consensus disorder prediction 1 32 - -
Seca3g00610 140 PANTHER BASIC LEUCINE ZIPPER 63 3 129 - -
Seca3g00610 140 Pfam bZIP transcription factor 56 100 IPR004827 GO:0003700|GO:0006355
Seca3g00610 140 FunFam BZIP transcription factor 55 106 - -
Seca3g00610 140 SUPERFAMILY Leucine zipper domain 56 105 IPR046347 GO:0003700|GO:0006355
Seca3g00610 140 Coils Coil 66 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00610 Seca-Chr3 9488804 9491520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00610 6 130 bZIP Transcription Factor Family AT5G24800 54.478 4.26e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca3g00610 bZIP_1 1.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00610 K25784 - gmx:778131 191.815