Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00603 ATGGATTCACCAAAGAAGCCTAACAAGATCAGACAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGGATGGCCAATTCTTCAAAAACAAACAGAGGTAACAACAACATATCTGAACGTGAGGGAGGATCAAGCAACATGGTTCCTAAAGGCTACCTAGCTGTTTGTGTTGGTGTGGACCTTAACAGGTTTGTGATACCAACAGAGTATTTGGGTCATCAGGCCTTTCATGTGTTACTCAGAGAAGCAGAGGAAGAGTTTGGGTTTGAACAAACTGGTGTTCTGAGGATACCTTGTGAAGTGTCTGTGTTTGAGAATATCTTGAAGATAGTAGAAGGAAAGGACAAGTTTTCTACACATAAATGTAGAATTAGCATTGAAAAGATGATGGGATACTGTTCCTCAAACCAGCTTGCTTATTCTCATCAACCACAAAGTCCAATGTGCAGATAG 459 0.3987 MDSPKKPNKIRQIVRLQQILKKWRRMANSSKTNRGNNNISEREGGSSNMVPKGYLAVCVGVDLNRFVIPTEYLGHQAFHVLLREAEEEFGFEQTGVLRIPCEVSVFENILKIVEGKDKFSTHKCRISIEKMMGYCSSNQLAYSHQPQSPMCR. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00603 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 109 IPR003676 GO:0009733
Seca3g00603 152 Pfam Auxin responsive protein 21 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00603 Seca-Chr3 9296522 9296980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00603 5 152 Calmodulin-binding Proteins AT4G31320 47.849 2.78e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00603 K14488 - gmx:100500385 265.388