Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00526 ATGTTTTTTCAGTTATTGTTCAAACTAGAACCTGGAGACATGGTTGGAGAAATAGGCGTGATGTTGAATATTCCACAACCTTATACAGTGAGAAGTAGAAGGCTATCCCAGGTCATACGAATCAGTCATCAACATTTCAAGGAAATGGTACAGCCATTTACTGACGATGGGAAGACAATCATCAGCAACTTTATTCAGGTTTTGAAGGGCCTAAATGGCGAGGTGCTAGAAGAAATACCGTGTGTAACAGAATTGTTGGGTGACCTGCATGATGAGCATCTAACACAAAATGAGGGCACACACGATAATGTTTCAGGTTATCATGAAGATGATCCATATGAAGAAGGTAACCTTAATCCTATGCTTAGTAAAAACAATATGACATGTTTACAATTACAGTCCTTATTCTATAGCGGATAA 420 0.3833 MFFQLLFKLEPGDMVGEIGVMLNIPQPYTVRSRRLSQVIRISHQHFKEMVQPFTDDGKTIISNFIQVLKGLNGEVLEEIPCVTELLGDLHDEHLTQNEGTHDNVSGYHEDDPYEEGNLNPMLSKNNMTCLQLQSLFYSG. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00526 139 SUPERFAMILY cAMP-binding domain-like 4 73 IPR018490 -
Seca3g00526 139 CDD CAP_ED 3 61 IPR000595 -
Seca3g00526 139 PANTHER POTASSIUM CHANNEL AKT1 7 90 IPR045319 GO:0005249|GO:0006813
Seca3g00526 139 Gene3D Jelly Rolls 3 75 IPR014710 -
Seca3g00526 139 ProSiteProfiles cAMP/cGMP binding motif profile. 1 67 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00526 Seca-Chr3 8388760 8391848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00526 4 88 Ion Channels AT4G32650 63.953 1.28e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00526 K21867 - gmx:100794620 162.925