Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00480 ATGGGAGCACCTTTTAAGGGTATCATTCAAGATGTCAAAGGAAGAGCCCAATGCTATAAGCAAGATTGGATTTGTGCAATCTGTTCTGGCGTTAGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTCCCTGTTATTGCTTTTGGAGAGCAACTAAGTAGGGATACAGATGGAAGCTTGAGCACAGTGGAAACATTGGCATCTACTGCAATTTGTGGAATTATCCACTCAATATTTGGTGGCCAGCCTTTGTTGATTTTAGGAGTTGCAGAACCAACTGTTATAATGTACACTTATCTATACAGTTTCTGCAAGAAAACACCACAACTGGGTGCCAAGCTCTTTCTGGCTTGGGCTGGTTGGGTCTGTGTTTGGACGGCACTCATGTTAATTCTACTTGCAATTTTTAATGCTTGCACGGTTATTACTAGGTTTACAAGAATTGCAGGGGAGTTATTTGGCATGCTAATTACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGGCGAGTTCAACACACCCAAGAATGAAGATCCTTCATCAGAGGAATTTCAATTCCAATGGCTGTATACAAATGGATTACTAGCCATCATTTTTTCATTTGGAGTACTTTTCACTGCCCTTAAAAGCAGAAGAGCAAGATCATGGCGATATGGAACAGGGTGGCTACGGGGTTTTGTTGCAGAGTATGGGGTTCCAATGATGGTAGTGATATGGACTGCAGCATCTTATATTATACCAGGCAAAGTTCCAGATGGTGTTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAATCTGAGTCGCTCTATCACTGGACAGTAGTGAAGGATATGGGGAAGGTACCGGTGCTGTATATATTTGGGGCAATTATTCCAGCTCTGATGATAGCAGGTTTATACTTTTTCGATCACAGCGTAGCATCACAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAGCCTTCTGCCTACCACTATGATGTTTTCTTGCTTGGAATAATGACTTTGATTTGCGGCATCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCTCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCGGTTGATCCGAAAGAGGGTGGTGAAAAGTGCCAAGGAATGTATTAAGCAACAAAGGACCAGCTCTGAATTATATGGAAAAATGCAAGCTGTGTTTATAGAAATGGATACAGCCCCTACCGTTAAGGAATTGGAGAATTTGAAGGAAGCTGTAATGAAATCTGATAGCAAGGATGGTGCAAAGGAAAATTTTGATCCTGAGAAACACATAGATGAATATCTGCCAGTCAGGGTTAATGAGCAAAGAATGACCAACTTATTGCAGTCCCTCCTGGTTGGTGTATCAATGTTAGGTATCTCTGTTATCAAAAAGATACCTACCTCAGTTTTATGGGGATATTTCGCCTACATGGCAATTGATAGTCTTCCAGGGAATCAGTTTTGGGAAAGGATATTGCTCCTTTTCATCACCCCAAGTCGGCGTTACAAAATTTTGGAAGGTTCTCATGCCTCATTTGTAGAGAAAGTACCATTCAAGACCATAGCTGCATTTACAGCCTTACAATTAGCATATTTTTTGTTGTGTTTCGGGGTTACATGGATACCTATTGGTGGAATATTGTTTCCAGTACCATTCTTCCTTCTCATAATTATAAGAGAACGCTTGCTTCCAAAGCTATTCAAGCCTAGTTATCTTCAGGAACTAGATGCTTCTGAGTATGAGGAAATACTTGGTGCTCCACATGGTGCCCCTTCACTAAGGGATAAGGAGCAACGTGATAGTGATACCGATGGAAGCTCGGAAGATTACTATGATGCCGAGATATTAGATGAGATGACAACCAGCAGAGGAGAGTTGAAACTTAGAAATGTAAGCTTCAATGAAAGAAACAGCAACAGCTTCAGCGAAGACAGACACTGTCAGGTTTACCCTGAAGATAGTGTCTGA 1998 0.4169 MGAPFKGIIQDVKGRAQCYKQDWICAICSGVSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYSFCKKTPQLGAKLFLAWAGWVCVWTALMLILLAIFNACTVITRFTRIAGELFGMLITVLFFQEAIKGLIGEFNTPKNEDPSSEEFQFQWLYTNGLLAIIFSFGVLFTALKSRRARSWRYGTGWLRGFVAEYGVPMMVVIWTAASYIIPGKVPDGVPRRLVCPLPWESESLYHWTVVKDMGKVPVLYIFGAIIPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVFLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRRLIRKRVVKSAKECIKQQRTSSELYGKMQAVFIEMDTAPTVKELENLKEAVMKSDSKDGAKENFDPEKHIDEYLPVRVNEQRMTNLLQSLLVGVSMLGISVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILEGSHASFVEKVPFKTIAAFTALQLAYFLLCFGVTWIPIGGILFPVPFFLLIIIRERLLPKLFKPSYLQELDASEYEEILGAPHGAPSLRDKEQRDSDTDGSSEDYYDAEILDEMTTSRGELKLRNVSFNERNSNSFSEDRHCQVYPEDSV. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00480 665 MobiDBLite consensus disorder prediction 597 621 - -
Seca3g00480 665 MobiDBLite consensus disorder prediction 602 616 - -
Seca3g00480 665 MobiDBLite consensus disorder prediction 646 665 - -
Seca3g00480 665 MobiDBLite consensus disorder prediction 649 665 - -
Seca3g00480 665 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016020
Seca3g00480 665 Pfam HCO3- transporter family 197 389 IPR011531 GO:0006820|GO:0016020
Seca3g00480 665 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016020
Seca3g00480 665 FunFam probable boron transporter 2 15 57 - -
Seca3g00480 665 Gene3D Helical hairpin bin 15 57 - -
Seca3g00480 665 PANTHER ANION EXCHANGE PROTEIN 2 594 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00480 Seca-Chr3 7791703 7796719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00480 4 664 Antiporters AT4G32510 67.359 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00480 K24194 - gmx:100787412 1174.84