Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00474 ATGGCAAAGAAGAAGATGTTCAAAAGGCTATGTGCCAGCCCTGACGAGGCCACAGCAAATGATGAGGAAGATAGAGATCACATAGAGAATATTGAACAAATATTAGAAAAGGATAGAAATTATAACTATTTCTGGGTGCGCTGCTTAAAGCTTATATGTGTTACCCTGTTTACTGTGCATTTTGCTGCTTGCTTTTTCTTCTTTCTCACTGTCAATCATGACGCGAAATCAACATGGCTTGGACTTATTTCTGATGCCACTGATAAGAGTCTCACCGGTAACTACATAACATCAGTATATTGGTCTATAATGACTCTTTCAACAGTTGGTTATGGTGATCTGCATCCTGTGGACACAAGGGAGATGGTATTTGATATAATATTTATGCTCTTCAATTTGGGACTAACATCATATCTTATTGGAAACATGACAAATTTAGTTGTTCACGGAACAAGCAGAACTAGAAGATATAGAGACACAGTGCAAGCTGCTGCAGGATTTGCTAACAGGAATCAGTTACCTATCCGCTTACAAGAACAAATGTTTTCTCATTTGTTTATGAAGTATAGAACTGATCTAGAAGGACTGCAGCAACAAGAGATCATTGATTCCCTTCCTAAAGCTATTCGATCTAGTGTCTCACACTACCTATTCTATTCATTTGTGGACAAATTATACTTGTTTCAGGGAGTGTCACATGACCTACTCTTTCAACTGGTAATAGTTTTTTGTTGGACTTCTATAATTCTGACCATAGTGTGA 762 0.3753 MAKKKMFKRLCASPDEATANDEEDRDHIENIEQILEKDRNYNYFWVRCLKLICVTLFTVHFAACFFFFLTVNHDAKSTWLGLISDATDKSLTGNYITSVYWSIMTLSTVGYGDLHPVDTREMVFDIIFMLFNLGLTSYLIGNMTNLVVHGTSRTRRYRDTVQAAAGFANRNQLPIRLQEQMFSHLFMKYRTDLEGLQQQEIIDSLPKAIRSSVSHYLFYSFVDKLYLFQGVSHDLLFQLVIVFCWTSIILTIV. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00474 253 Gene3D - 26 148 - -
Seca3g00474 253 Pfam Ion transport protein 34 154 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Seca3g00474 253 SUPERFAMILY Voltage-gated potassium channels 34 185 - -
Seca3g00474 253 PANTHER POTASSIUM CHANNEL AKT1 32 242 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00474 Seca-Chr3 7755831 7757795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00474 35 240 Ion Channels AT2G26650 69.231 1.03e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00474 K21867 - gmx:100786870 334.339