Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00471 ATGTCAGCATCTCGAATTTTTGACACCATTAATGAGTGCATCTCCCTGGTACAATCAGATTCCCATGAAGCTCAAGAGAAAGGTCTTCAAACGCTAGCTGCTATCACCAAGGTAAGTCCCCAAAACAGAACCTTGCTAGCTCAAACAGAAGAAGCAATCCCAATACTAGCAACACTGACAAATGCTTCCTCCCCCATTATCCAAACACTTTCCTTGTTGATCCTCTTTAACCTGTCCCTAAATCCTGATCTAAAACAGTCACTTGCTGATATGGAAACCATTTATTACCTAAACTCCCTAATTAGCTCATCAAGTTATTCTCTTGATTCCTGCAAACTTGCCTCCTCATTGATTTGCAGTTTGGCCATGCATGATAAAAACAAGGCCAAATTTGGGGTAGCAGGTACAGTTCAGTTGCTTGTGAAGGCTATTAAAGGCTCTGGTGACTCTGATGCTCATCACCTTATGAGTTCTTTGGCAGAGCTTGTGCTGTTCCATGGAAACTGCACTTTGGCAGTGAGAGCTGGAGCAGTTCCAGTGCTGCTTCAAGTTGTAGAGAACACTGAAAATGAGGACGTGGCTGGAACATCTCTTACTGTTCTTGGTCTGCTTGCAAGGTTTGATGAAGGGCTAAGTGGTCTGAAGAAAATGAATCAGATAATTGGTTCAATGTTAAGTGTGTTGAGAGGGAGGTCTTTGTTGAGTAAAGAGGGTGCAGCTGATATCCTTATTCGCCTTTTTGATGATAGTGAAGAGTGTGTCAGAGAGGCTTTGATGTTACCAGAATTCTCAAGTGTGTTAGCTGATCTTTCTGTGAGGGGTTCGGCAAGAGTTAGAGATAAGGCTGATTTACTAATGAGGAAGATTGCAAAGGTGAGCAGCCAAGAAGCTAATATGGAACCAACCTCCCTATAG 915 0.4284 MSASRIFDTINECISLVQSDSHEAQEKGLQTLAAITKVSPQNRTLLAQTEEAIPILATLTNASSPIIQTLSLLILFNLSLNPDLKQSLADMETIYYLNSLISSSSYSLDSCKLASSLICSLAMHDKNKAKFGVAGTVQLLVKAIKGSGDSDAHHLMSSLAELVLFHGNCTLAVRAGAVPVLLQVVENTENEDVAGTSLTVLGLLARFDEGLSGLKKMNQIIGSMLSVLRGRSLLSKEGAADILIRLFDDSEECVREALMLPEFSSVLADLSVRGSARVRDKADLLMRKIAKVSSQEANMEPTSL. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00471 304 PANTHER U BOX DOMAIN-CONTAINING 13 287 - -
Seca3g00471 304 Gene3D - 7 115 IPR011989 -
Seca3g00471 304 SUPERFAMILY ARM repeat 10 278 IPR016024 -
Seca3g00471 304 Gene3D - 116 300 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00471 Seca-Chr3 7709697 7711042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00471 15 282 U-box Gene Family AT1G23030 25.818 1.93e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00471 - - gmx:121174819 419.083