Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00427 ATGTTCGCAGAAGAGAATGGCCTTAAGGGAGACCCACGCCTTCAACGCATCTCCAAAGCCATCAGAGTCGTCCCTCACTTCCCCAAAGATGGAATAATGTTTCAAGACATAACGACATTGTTGTTGGATCACAAAGCGTTTAAAGATACTGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAAGCAAGAGGATTCATGTTTGGTCCCGCAGTTGCGTTGGGCATTGGTGCAAAGTTTGTCCCTTTACGCAAACCTGGGAAGCTGCCAGGTGAAGTGATTGCCGAAAAATATTCTCTAGAGTATGGAACTGATTGTTTGCAGCTGCATGTTGGTGCTGTCCAGCCTGGTGAGCGAGCCATAGTTGTTGATGATTTAGTGGCCACAGGGGGGACTCTGTCAGCAGGAATAAGACTTCTAGGTGATTTGCAAGCTTGTTTTTGTGTAGTTTTTACTGCTTCTGTCTACATTCTTTTTCACTTGTGA 510 0.4529 MFAEENGLKGDPRLQRISKAIRVVPHFPKDGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPAVALGIGAKFVPLRKPGKLPGEVIAEKYSLEYGTDCLQLHVGAVQPGERAIVVDDLVATGGTLSAGIRLLGDLQACFCVVFTASVYILFHL. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00427 169 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 158 - -
Seca3g00427 169 Hamap Adenine phosphoribosyltransferase [apt]. 17 169 IPR005764 GO:0003999|GO:0005737|GO:0006168
Seca3g00427 169 CDD PRTases_typeI 51 168 IPR000836 -
Seca3g00427 169 Pfam Phosphoribosyl transferase domain 43 156 IPR000836 -
Seca3g00427 169 Gene3D - 6 166 IPR029057 -
Seca3g00427 169 FunFam Adenine phosphoribosyltransferase 1 5 166 - -
Seca3g00427 169 SUPERFAMILY PRTase-like 18 153 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00427 Seca-Chr3 7076958 7081781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00427 1 164 PRT Gene Family AT5G11160 73.333 9.03e-88 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00427 K00759 - gmx:100499904 280.796