Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00373 ATGAAGAAAGGAGAAATTGCATTGGTGACCATACGGCCTGAATATGCTTTTGGTCCATCTGGGTCCTCTCAGGAGGTGGCTATTGTCCTTCCCAGTTCCACTGTGTACTATGAAGTTGAGTTGCTTTCCTTCGTAAAGGTGAGATAA 147 0.449 MKKGEIALVTIRPEYAFGPSGSSQEVAIVLPSSTVYYEVELLSFVKVR. 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00373 48 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 42 IPR001179 GO:0003755
Seca3g00373 48 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 45 IPR001179 GO:0003755
Seca3g00373 48 Gene3D - 1 48 IPR046357 GO:0003755
Seca3g00373 48 SUPERFAMILY FKBP-like 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00373 Seca-Chr3 6273648 6273794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00373 1 48 Calmodulin-binding Proteins AT5G48570 41.667 3.25e-06 39.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00373 K09571 - gmx:100810243 78.5666