Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g00368 | ATGTATGTTGGATCTTCCCAAGCCCGAAGTGTTATAAGAGAGCATGAATTTTACTTTCCAAAAAAGCAGAAGAAGATCAAGAAAAAGAAATCCGGTCACATAGTTAGTGAAAGCAAGCAAGACAGGATTAAGTTTGATGTGCTTTTGACATCATATGAGATGATCAACTTTGACACAGCATCATTAAAACCTATAAGATGGGAGTGCATGATAGTTGATGAAGGTCACCGTCTCAAAAACAAGGATTCAAAATTATTTTCTTCATTGAAGCAATACTCTAGCAGACATCGTGTGCTTTTGACTGGGACTCCTCTACAGAATAACTTGGATGAACTGTTTATGCTTATGCATTTCCTTGATGCTGGGAAGTTTGGAAGTTTAGAGGAGTTCCAGGAAGAGTTCAAGGATATCAATCAAGAGGAACAGATTTCAAGGCTTCACAAAATGTTGGCCCCACATCTTCTGCGAAGAGTGAAAAAAGATGTCATGAAGGAACTACCTCCTAAAAAGGAACTTATTCTACGTGTTGAATTGAGCAGCAAACAGAAAGAATATTATAAGGCAATTTTGACCCGTAATTATCAGATATTAACTCGTCGTGGTGGTGCTCAGATCTCTCTTATCAATGTTGTTATGGAACTGCGTAAGCTTTGTTGTCATCCTTACATGTTAGAAGGAGTTGAACCAGATATTGACGATCCAAAAGAATCATTTAAACAGCTGCTGGAATCATCAGGGAAGTTGCAATTACTGGACAAGATGATGGTGAAGCTTAAAGAGCAAGGACATAGAGTCCTCATATATTCCCAATTTCAGCACATGCTTGACTTGCTTGAAGATTACTGTTCTTACAAGAATTGGCTGTATGAAAGGATAGATGGCAAGGTTGCTGGAGCTGAAAGACAAATACGGATAGATCGTTTTAATGCCAAAAATTCTTCAAGATTTTGCTTTCTTCTTTCTACTAGAGCTGGGGGATTGGGAATAAACCTTGCAACTGCTGACACGGTTATTATATATGATAGTGATTGGAATCCTCATGCTGATTTACAAGCTATGGCTAGAGCTCATCGACTTGGGCAAACAAACAAGGTATTGATTTATAGGCTTATAACACGAGGAACAATTGAAGAAAGGATGATGCAGATGACTAAGAAGAAAATGGTGTTAGAACACCTTGTTGTAGGGAGGCTGAAGACTCAAAATATCAACCAGGAAGAGTTGGATGACATCATAAGGTACGGCTCAAAGGAGTTATTTGCAGATGAGAATGATGAGGCAGGAAAATCCCGCCAAATCCATTATGACGCAGCTGCTATCGATAGATTGCTGGACCGTGACCAAGTTGGAGATGAAGAGGCTACTGTGGATGATGAAGATGAAGATGGATTTTTGAAGGCCTTTAAGGTTGCAAATTTTGAGTATGTTGATGAGGTTGAGGCTGCAGAAGAGGAGGCAGCCCAAAAAAGAGCAATGGAGACTGTGAACAGTTCAGAAAGAACACATTACTGGGAGGAGTTGTTAAGAGACAAGTATCAAGAACATAAAGTTGAGGAGTTTAATGCCTTGGGAAAAGGGAAACGAAACCGCAAACTGATGGTTTCTGTTGATGAGGATGACCTTGCTGGTCTGGAAGATGTAAGCTCTGATGGTGAAGATGACAATTATGAAGCAGAGCTTACTGATGGTGATACAAATCCCGTTGGAATTACTTCTGCTAAAAGGCCTTATAAAAAAAAAGCACGTGCAGCAGATAGCACAGAACCACTTCCTCTGATGGAAGGTGAAGGAAAAGCATTCAGAGTACTTGGTTTTAATCAAAATCAGAGGGCTGCATTTGTGCAAATTTTGATGAGGTTTGGGGTTGGTGATTTTGATTGGAAGGAGTTTACTTCCCGCATGAAACAGAAGACTTATGAAGAAATCAAAGATTATGGAACCCTTTTCTTGTCTCATATTGCTGAAGATATAACTGATTCCTCTACATTCTCAGATGGTGTTCCAAAAGAGGGACTCCGAATCCAAGATGTACTTGTTAGGATTGCAGTTTTGCTCCTGATAAGGGACAAAGTGAGGTCTGCATCAGAACATCCTCAAACTCCGCTGTTTTCAGATGACATCTTATTACGCTATCCAGGTTTGAAGGGTGCAAAGATATGGAAGGAGGAGCATGATTTAGTTCTTCTGCGTGCTGTGTTAAAGCATGGGTATGGAAGGTGGCAAGCTATTGTTGATGATAAGGATCTAAAAATTCAGGAGGTCATCTGTCAGGAGTTGAATCTTCCCTTCATAAATTTACCAGTACCAGGACAAATTGGCTCTCAGGCACAAAATGGTGCAAATTTGACAAATGCGGAAGTACCCAACAATCAATCCAGGGAAAATGGTGGGAGTGACATTGCAGCTGATGGGGCACAAGGTTCAGGTGATGCTAGGAGCCAAGCACAGTTATATCAAGACTCCTCCATATTATATCATTTTAGGGACATGCAAAGAAGACAGGTTGAGTTTATAAAAAAGAGGGTTCTTCTCTTGGAAAAAGGGCTCAATGCTGAGTACCAGAAAGAATACTTTGGTGACCCAAAAGCAAGTGAAGAAATTAAAATTGAATCCAAGCCTACAAATTTGCAAAATTATAAATCAGGGGACACTGACACCCAAATGATTGATCAACTGCCACAAGTAGAAACAATAGATTCAGAAGATATTTCGGTAGCTTGTGATAATGATCCAAATCGATTGGAATTAGTTCGACTTTACAATGAGATGTGCAAGGTAGTGAAGGAAAATCCCATGGATTTAGTTCAAACATCTTTGGCAAGAGAACCTGAAGACGTCACTATGGTGAAGAATTTCCCACCACTAGAAACCATTTGTAAAGATATCAACAGAATTCTAACACCCACGCAAGAACAGCCTATTGCAGAAATGCCAAAATTGAATTCAGATAACAAATCAGAGGACGCATCACCCGGTGAAGTTTTGGGGTCCAAATCGTTGCCTATCTCTCAAGATAACTGCAAACCTGATACTTCGGCAGACAATGAGAGACAAGATATGGTAATAGATTCTGAACCTAAAAAAGAAAGCTGCTCAAACCTGGTAAATGAGAAGAATGAGGAGAATGAAACACCGAGTCTTCCAGAGAAAAACGAAAGTAACACAGAAATGGATGAAACTATGAATGATGCTGAGTTGAATGAAAACACAGAGAAGTCTGACGCTGGGGTCATTGTATTGGAAGAATAG | 3249 | 0.3986 | MYVGSSQARSVIREHEFYFPKKQKKIKKKKSGHIVSESKQDRIKFDVLLTSYEMINFDTASLKPIRWECMIVDEGHRLKNKDSKLFSSLKQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIDDPKESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCSYKNWLYERIDGKVAGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKTQNINQEELDDIIRYGSKELFADENDEAGKSRQIHYDAAAIDRLLDRDQVGDEEATVDDEDEDGFLKAFKVANFEYVDEVEAAEEEAAQKRAMETVNSSERTHYWEELLRDKYQEHKVEEFNALGKGKRNRKLMVSVDEDDLAGLEDVSSDGEDDNYEAELTDGDTNPVGITSAKRPYKKKARAADSTEPLPLMEGEGKAFRVLGFNQNQRAAFVQILMRFGVGDFDWKEFTSRMKQKTYEEIKDYGTLFLSHIAEDITDSSTFSDGVPKEGLRIQDVLVRIAVLLLIRDKVRSASEHPQTPLFSDDILLRYPGLKGAKIWKEEHDLVLLRAVLKHGYGRWQAIVDDKDLKIQEVICQELNLPFINLPVPGQIGSQAQNGANLTNAEVPNNQSRENGGSDIAADGAQGSGDARSQAQLYQDSSILYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFGDPKASEEIKIESKPTNLQNYKSGDTDTQMIDQLPQVETIDSEDISVACDNDPNRLELVRLYNEMCKVVKENPMDLVQTSLAREPEDVTMVKNFPPLETICKDINRILTPTQEQPIAEMPKLNSDNKSEDASPGEVLGSKSLPISQDNCKPDTSADNERQDMVIDSEPKKESCSNLVNEKNEENETPSLPEKNESNTEMDETMNDAELNENTEKSDAGVIVLEE. | 1083 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g00368 | 1082 | Gene3D | - | 167 | 391 | IPR027417 | - | |
| Seca3g00368 | 1082 | MobiDBLite | consensus disorder prediction | 970 | 1082 | - | - | |
| Seca3g00368 | 1082 | Gene3D | - | 675 | 854 | - | - | |
| Seca3g00368 | 1082 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 24 | 122 | IPR014001 | - | |
| Seca3g00368 | 1082 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 250 | 411 | IPR001650 | - | |
| Seca3g00368 | 1082 | MobiDBLite | consensus disorder prediction | 782 | 813 | - | - | |
| Seca3g00368 | 1082 | MobiDBLite | consensus disorder prediction | 1065 | 1082 | - | - | |
| Seca3g00368 | 1082 | Pfam | SNF2-related domain | 36 | 224 | IPR000330 | GO:0005524|GO:0140658 | |
| Seca3g00368 | 1082 | Pfam | CHD subfamily II, SANT-like domain | 572 | 705 | IPR009462 | GO:0003677|GO:0006338 | |
| Seca3g00368 | 1082 | SMART | DUF1086_2 | 548 | 708 | IPR009462 | GO:0003677|GO:0006338 |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g00368 | K11643 | - | gmx:100804203 | 1891.7 |
Showing 1 to 1 of 1 entries