Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g00353 | ATGATGGAACCAACATGCGTAGATACTTCTCTCAACCTCAACAGTATTCCCTCTCTCGAAACCGATGCTGCGCAGGCTAAGGTTTTGGTTGAGGAATTGCAGCGTCTAAGTTGTGAGAATAAGAGGTTAACGGAGACGCTGAACCACATGTACGAAAACTATCTTGTTTTGCAAAAGCATTTGAGTCAATTCAATAACCAAATGAGGAACACGGATTTTGAAAAGGAATTAGCGGCGACACCATCGGTAGCGTTGAAGAGAAAGGTGGAGAATGAGAATTGTATGAATCTGTTTGGTGTTAGCGAGTGCAGCACCACTACTGAGGAAGAGACATTCAAAAGGCCCAAGCATAACACCTCACCAAAGGTTTCCAAAGTTCTTGTACGAACAGAGGCATCTGATACTAGCTTATATGTGAGGGATGGATATCAGTGGAGAAAATATGGCCAGAAAGTCACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCTCCCACCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGCAGAAGACCCTACGGTACTGGTGACAACTTATGAAGGAGAGCACAACCATACGCATCATCACCAAGCGGAAATATCACTGACTTCGAGCCAAAGTGAGAATATCTTCCCTGCCCCGGCAGGTTCAGCATCACCCAAGAATCGGAGCACAGTTGCAGGTCCAACTGTAACACTTGACTTGGTCCAGTCAAAATTGGTTGACAATGCCGAAAAGTCATCTATCCAGCAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACAAGAGATCCTAATTTCACAGCCGCACTTGCTACTGCCATTTCTGGAAGAATTCTAGACCATTCTTCTATAGAAAAACGGTGA | 882 | 0.4456 | MMEPTCVDTSLNLNSIPSLETDAAQAKVLVEELQRLSCENKRLTETLNHMYENYLVLQKHLSQFNNQMRNTDFEKELAATPSVALKRKVENENCMNLFGVSECSTTTEEETFKRPKHNTSPKVSKVLVRTEASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCPVKKKVQRSAEDPTVLVTTYEGEHNHTHHHQAEISLTSSQSENIFPAPAGSASPKNRSTVAGPTVTLDLVQSKLVDNAEKSSIQQFLVQQMATSLTRDPNFTAALATAISGRILDHSSIEKR. | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g00353 | 293 | Coils | Coil | 26 | 53 | - | - | |
Seca3g00353 | 293 | Gene3D | WRKY domain | 122 | 200 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca3g00353 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 25 | 284 | IPR044810 | GO:0003700 | |
Seca3g00353 | 293 | SMART | WRKY_cls | 139 | 199 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca3g00353 | 293 | Pfam | WRKY DNA -binding domain | 141 | 197 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca3g00353 | 293 | ProSiteProfiles | WRKY domain profile. | 141 | 200 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca3g00353 | 293 | FunFam | WRKY transcription factor 40 | 124 | 201 | - | - | |
Seca3g00353 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 136 | 199 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g00353 | Seca-Chr3 | 5862992 | 5865296 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g00353 | 7 | 292 | WRKY Transcription Factor Family | AT1G80840 | 46.711 | 5.74e-76 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca3g00353 | WRKY | 5e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g00353 | - | - | gmx:100127373 | 400.979 |