Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00353 ATGATGGAACCAACATGCGTAGATACTTCTCTCAACCTCAACAGTATTCCCTCTCTCGAAACCGATGCTGCGCAGGCTAAGGTTTTGGTTGAGGAATTGCAGCGTCTAAGTTGTGAGAATAAGAGGTTAACGGAGACGCTGAACCACATGTACGAAAACTATCTTGTTTTGCAAAAGCATTTGAGTCAATTCAATAACCAAATGAGGAACACGGATTTTGAAAAGGAATTAGCGGCGACACCATCGGTAGCGTTGAAGAGAAAGGTGGAGAATGAGAATTGTATGAATCTGTTTGGTGTTAGCGAGTGCAGCACCACTACTGAGGAAGAGACATTCAAAAGGCCCAAGCATAACACCTCACCAAAGGTTTCCAAAGTTCTTGTACGAACAGAGGCATCTGATACTAGCTTATATGTGAGGGATGGATATCAGTGGAGAAAATATGGCCAGAAAGTCACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCTCCCACCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGCAGAAGACCCTACGGTACTGGTGACAACTTATGAAGGAGAGCACAACCATACGCATCATCACCAAGCGGAAATATCACTGACTTCGAGCCAAAGTGAGAATATCTTCCCTGCCCCGGCAGGTTCAGCATCACCCAAGAATCGGAGCACAGTTGCAGGTCCAACTGTAACACTTGACTTGGTCCAGTCAAAATTGGTTGACAATGCCGAAAAGTCATCTATCCAGCAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACAAGAGATCCTAATTTCACAGCCGCACTTGCTACTGCCATTTCTGGAAGAATTCTAGACCATTCTTCTATAGAAAAACGGTGA 882 0.4456 MMEPTCVDTSLNLNSIPSLETDAAQAKVLVEELQRLSCENKRLTETLNHMYENYLVLQKHLSQFNNQMRNTDFEKELAATPSVALKRKVENENCMNLFGVSECSTTTEEETFKRPKHNTSPKVSKVLVRTEASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCPVKKKVQRSAEDPTVLVTTYEGEHNHTHHHQAEISLTSSQSENIFPAPAGSASPKNRSTVAGPTVTLDLVQSKLVDNAEKSSIQQFLVQQMATSLTRDPNFTAALATAISGRILDHSSIEKR. 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00353 293 Coils Coil 26 53 - -
Seca3g00353 293 Gene3D WRKY domain 122 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca3g00353 293 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 284 IPR044810 GO:0003700
Seca3g00353 293 SMART WRKY_cls 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g00353 293 Pfam WRKY DNA -binding domain 141 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g00353 293 ProSiteProfiles WRKY domain profile. 141 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g00353 293 FunFam WRKY transcription factor 40 124 201 - -
Seca3g00353 293 SUPERFAMILY WRKY DNA-binding domain 136 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca3g00353 Seca-Chr3 5862992 5865296 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00353 7 292 WRKY Transcription Factor Family AT1G80840 46.711 5.74e-76 232
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca3g00353 WRKY 5e-24 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00353 - - gmx:100127373 400.979