Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00345 ATGGCTGGTTGTTCAAGAACTACCTCTGCTTCTCTTTTGCTCCTATTTCTTCTCTTTGGCTTCTCTGCAGCTAAGGAACTATTGGTTGGAGGCAAGATAGATGCATGGAAGGTTCCATCCTCTGAAGCAGACTCCCTCAATCAATGGGCTGAAAAGTCTCGTTTCAAAGTTGGTGATTTTCTTGTTTGGAAATATGACGGTGGGAAAGACTCAGTTTTGCAAGTAAACAGGGAAGGTTACGCTAATTGCAACACCTCCAACCCCATTGAAGAGTACAGTGATGGGAACACTAAGGTGAAGCTAGACCGTCCTGGGCCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGACAAAAGGTGATTGTGGTGGTTGTGTCTCCAAAGCGCAGCAGATACATGGCAATTTCTCCTGCACCTTCTCCTGCAGAGTTTGAAGAAGGTCCAGCTGTTGCTCCTACTAGCAGTGCCACAGTGTTGCAAGGTGGCCTTGTGACTGCTCTGGCTATGTATGTGGGTTTATTTCTCATGTGA 540 0.4667 MAGCSRTTSASLLLLFLLFGFSAAKELLVGGKIDAWKVPSSEADSLNQWAEKSRFKVGDFLVWKYDGGKDSVLQVNREGYANCNTSNPIEEYSDGNTKVKLDRPGPFYFISGAKGHCEKGQKVIVVVVSPKRSRYMAISPAPSPAEFEEGPAVAPTSSATVLQGGLVTALAMYVGLFLM. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00345 179 CDD OsENODL1_like 25 127 IPR041846 -
Seca3g00345 179 PANTHER BLUE COPPER PROTEIN 26 140 IPR039391 GO:0009055
Seca3g00345 179 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Seca3g00345 179 FunFam Early nodulin-like protein 1 24 132 - -
Seca3g00345 179 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Seca3g00345 179 Gene3D - 23 133 IPR008972 -
Seca3g00345 179 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00345 Seca-Chr3 5747306 5747932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00345 11 176 Phytocyanin Superfamily AT2G25060 56.886 1.35e-66 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00345 - - tpra:123897354 266.929