Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00322 ATGCACAAATTACCTTTGGCTCAAACTTGGGTCTCATGCATCCAACAAGGCAAAGATGGGTGCAGACACAATGAAGATAACTATTTACACTGTATATCTCCTGTGGAACAAGCTTGCTATGTTGGTGATCAATCTGTCAGGTTTTTTCATGAGGCTTGCATTGAGCATCACTTGTTAAAAGGTCAAGGTGTTGCTGGGGGAGCTTTTATGACAAATCAACCATGCTTCTCAACTGATATTACTTCCTTAAGCAAAACAGACTATCCACTGTCTCATCATGCGAGGTTGTTTGGATTGAGGGCCGCAGTTGCCATACGCCTCAGAAGCATCTATAGTAATACAGATGACTATGTTCTCGAGTTCTTCTTGCCTGTAGATTGCATTGACAGTGAAGAACAGAAAAATATGCTTACATCATTGTCCATGATCATACAAAGGGTTTGCCACAGCTTGCGGGTTATAAGAGATAAGGAGTTGGAGGAAACTGACTTATCCACTGATGAAGTAATAGCCCTTGCAGATAGTGGATTTACTAGGACTGCAATTTGTTCAGAACTCCAAAACAGAATGATGGTTCCCTCATTGGGTACTGAAGAAAACTCAAGTGAAACAATGAGTAGAAAATTCTCTGATCTAAGGCAGCAACAAGAAAATCTTATTTTAAAAGGAAACCTTGACTGTGGTAGGGAGTCTTCTACCTTTGTTGAGGGTAACTTGTCAAGTGTGGGAATAAGTAAAACTGGAGAGAAAAGACGGGCCAAAGCAGATAAAACTATCACTCTGCAAGTTCTTAGGCAATATTTTGCTGGAAGCCTTAAAGATGCTGCTAAGAATATCGGTGGTAAGCTTTGTACAAGAGCATGTTTCCATGTTATGTTTTTGTATGCAAACACTAAGGCACGCGAATGGAATGGAACTAAAAGGATCTGTTTGTTCCCTTTTGTTCTATCCTTTTTAGTAGAATCAAGATGTGTCATTTTTTTAACTTCATGTATTGTATTGTTCTGTTCTGTTGTGTTTTTAAAATACAACAAAACTTCATGGTCTGTTGCGTCCCCTTCTAACATGCTTACCAATTACCATACACACTCTAAATTGAAATGTTAG 1107 0.3893 MHKLPLAQTWVSCIQQGKDGCRHNEDNYLHCISPVEQACYVGDQSVRFFHEACIEHHLLKGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSNTDDYVLEFFLPVDCIDSEEQKNMLTSLSMIIQRVCHSLRVIRDKELEETDLSTDEVIALADSGFTRTAICSELQNRMMVPSLGTEENSSETMSRKFSDLRQQQENLILKGNLDCGRESSTFVEGNLSSVGISKTGEKRRAKADKTITLQVLRQYFAGSLKDAAKNIGGKLCTRACFHVMFLYANTKAREWNGTKRICLFPFVLSFLVESRCVIFLTSCIVLFCSVVFLKYNKTSWSVASPSNMLTNYHTHSKLKC. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00322 368 PANTHER PROTEIN NLP8 2 280 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00322 Seca-Chr3 5440550 5444156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00322 2 280 NLP Transcription Factor Family AT1G76350 51.557 7.88e-86 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00322 - - gmx:100785135 460.685