Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00128 ATGGTCATGGTGCTGTTTGTTCATCATCATGTACTGAAGTTGATATCAATACTAATTACTCTCTGCACTTTATCAGATTGCTATGATCCGTTGGATCCAAATGGGAACATTTCGGTAACCTTTGACATTTACCAGAGCACAGATAATGGATATCTGGCAAGGGTGACTGTTCAAAACTATTATCTATATCGGCATGTAGACAAACCTGGTTGGAAACTAGGATGGACATGGGCTAACAATGAAGTGATATGGTCAATGAATGGTGCTTTTGCAACTGATAGAGGGAATTGCTTAGGTTATAGCGGTTCTCAGATGCCACATTCCTGCAAGAAAGATCCTACCATAGTTGATCTCACTCCACAAGTCTCACAAAATAGGTCAGAGCATTGTTGTCGTGGTGGCCTCCTCTCTGCCTGGGCTATAGATCCTTTGAATTCATTCTCTTCATTTGAACTTGAAGTTCGCAACTTGGGGAAAAATCCACTTGGACAACCACCTACTAATCTCACATTGATGGCCCCAGGCCCTGGTTACACTTGTAGCCCTTTTCTGGATACTGATCCCACACTGTCCTCAGATTTTGGGGGACTAAGACAAGTTCCAGTTCTCATATGCTGTGTTTCCCTCTCAACATTTTACAATCCTACCATCACATCATGCCGTAATTGCAGTTGTGGATGCAGAGAAGCAGATATAAGTACAGTGTCTTGCATAAGGCCAGGTGACCCCTCACTACCAGAGTCAAATGAGGATAACATAATTGAATGCAGTGACCACATGTGCCCAATTCGAGTCCATTGGCATTTCAAGAACAACTATATGGATCATTGGAGGGTGAAGCTTACAATTTCCAACTACAACTACAAGAAAAACTTCTCAAACTGGAACGTATTGGTTCAACATCCTGGTTTCAGCCAAAAAGCAACAATTTACAGCTTCAACAGCACTAAACTTCCAGCCGTTGGGCTCCAAGAATCTGCAAAGCAAGAAACTGCAATGGCTGCGCTTGGTGACCAATCTCCAGAGGAAGCCATGGTAGCCTCCGAACCTCAACCTCACAACAACAAACCCATTTCCAACATCGTCATCGTCATTGCTATGCAGACGGAGGCGCTTCCCGTTGTCAATAGGTTTCAGCTCACTGAAGACCCTCACTCTCCGTTTCCGGAAGGGGTTCCTTGGGTCCGTTATCATGGGACATACAAAGATCTCAATATAAACTTGATTTGGCCTGGAAAAGATCCAGGTTTGGGTAAGGATGTTTCTTCTTTTCAATTTATTTTGTTCTACACCACTTCCAGCAAACAGGTTACAAGTCAAAAAGGGGTTGATAGTGTAGGCACGATATCATCTGCTCTTGTAACATATGCTGCTATTCAAGCGTTACAGCCAGACTTGATCATAAATGCAGGTACTGCTGGTGGCTTCAAGGCCAAAGGAGCTAGCATTGGTGATATTTTCATTGCATCAGATTGTGCTTTTCACGACAGAAGAATACCCATACCTGTTTTTGATCTGTATGGTGTTGGTTTACGTAAAGCCTTTGAAACACCCAATCTTGTAAAGGAACTTAATCTAAAGGTGACTGCTACCTGCTAA 1599 0.4303 MVMVLFVHHHVLKLISILITLCTLSDCYDPLDPNGNISVTFDIYQSTDNGYLARVTVQNYYLYRHVDKPGWKLGWTWANNEVIWSMNGAFATDRGNCLGYSGSQMPHSCKKDPTIVDLTPQVSQNRSEHCCRGGLLSAWAIDPLNSFSSFELEVRNLGKNPLGQPPTNLTLMAPGPGYTCSPFLDTDPTLSSDFGGLRQVPVLICCVSLSTFYNPTITSCRNCSCGCREADISTVSCIRPGDPSLPESNEDNIIECSDHMCPIRVHWHFKNNYMDHWRVKLTISNYNYKKNFSNWNVLVQHPGFSQKATIYSFNSTKLPAVGLQESAKQETAMAALGDQSPEEAMVASEPQPHNNKPISNIVIVIAMQTEALPVVNRFQLTEDPHSPFPEGVPWVRYHGTYKDLNINLIWPGKDPGLGKDVSSFQFILFYTTSSKQVTSQKGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKAKGASIGDIFIASDCAFHDRRIPIPVFDLYGVGLRKAFETPNLVKELNLKVTATC. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00128 532 Pfam Phosphorylase superfamily 361 505 IPR000845 GO:0003824|GO:0009116
Seca3g00128 532 PANTHER PROTEIN COBRA 16 322 IPR006918 GO:0010215|GO:0016020
Seca3g00128 532 SUPERFAMILY Purine and uridine phosphorylases 351 504 IPR035994 GO:0003824|GO:0009116
Seca3g00128 532 Pfam COBRA-like protein 51 198 IPR006918 GO:0010215|GO:0016020
Seca3g00128 532 Gene3D Nucleoside phosphorylase domain 350 532 IPR035994 GO:0003824|GO:0009116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00128 Seca-Chr3 1846374 1853631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00128 5 318 COBRA Gene Family AT3G02210 42.982 3.55e-92 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00128 - - vra:106760500 536.954