Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00097 ATGGGTTCTGAGGTGGGCGATGTTTCCACCGCCAGTAAATGGCTGGGTTTCGTGGCGGCCGTTTGGATTCAAGCAATCTCCGGTAACAACTACACATTCTCCAATTACTCCGATGCTTTGAAATCCCTAATGCATCTCACTCAGATTCAGCTCAATAATCTCTCCGTAGCCAAAGATGTTGGCAAGGCTTTTGGGCTTCTTGCTGGCCTTGCCTCTGACCGATTCCCAACTTGGGCTATTCTTCTCATTGGCTCCATCGAAGGCCTCATCGGCTATGGAGTTCAATGGCTCGTCGTCAGCCACAGGATTCAACCCCTTCCCTACTGGCAGATGTGTATATTTCTATGCATGGGTGGCAACTCCACAACCTGGATGAACACCGCCGTTTTGGTCACCTGCATGCGCAATTTCCGCCGAAACAGAGGCCCTGTTTCCGGCATTCTCAAAGGCTATGTCGGGTTAAGCACCGCCATATTCACCGACCTTTGCTCTGCTCTCTTCGCCGACGACCCTGCTTCCTTCCTCATCATGCTCTCTGTAGTTCCATTCGCCGTTTGCCTCACCGGTGTCTTTTTCCTCCGTGAGGTTCCTCCGGCTGATTCCACCGCCGCGCAAGACAAGGAAGAGTCGAGGTATTTCGGCCTTTTCAATGCCGTCGCCGTCGTCGTTGCCGTTTACCTCTTGGTTTATGGCTTCGTGCCCAACCCCTCCAGTTTGGTTTCTAGGGTTTTCGCCGTGGTTTTGCTCCTTCTGTTGGCGGCGCCGTTGGGAATACCGGTCTACTCATACTTCAAAGCCCGGTTCAAACCGGGTCTGGATATAGAGGGAAGGGTGACTGAACCGTTGATTCGCAGTCAAGAGGAGGGAAATGAAACCGAGGCAGATAACAGAGTGGACAAAGAGACGGAGGTGATAAGGAGGGGACCGGTGGTGGGGGAGGAGCACACCATAGTGGAGGCGCTGAAAACGTTGGATTTTTGGATATTGTTTGTGTCTTTTCTGTGTGGGGTTGGAACGGGTTTGGCAGTTATGAACAATATGGGCCAGATTGGGTTGGCCCTGGGTTACTCAGATGTGTCCATCTTTGTATCTTTGACCAGTATTTGGGGCTTTTTCGGTCGGATCATATCGGGTTCGGTTTCAGAGTACTTCATCAAGAAAGCTGCAACTCCTAGACCTCTTTGGAATGCAGCTTCTCAAATTGTGATGGCTGTGGGGTACATACTCCTGGCCTTGGCTATGCCCGGTTCCCTTTACATAGGCTCTACAATAGTTGGCATATGCTATGGAGTCCGGCTTGCCATTACTGTCCCAACAGCATCTGAGTTATTTGGCCTCAAATATTATGGTCTCATATACAACATTCTCATCCTTAACCTTCCCTTAGGCTCTTTCCTCTTTTCTGGTCTGCTTGCTGGCATACTGTATGATATGGAGGCAACTACCACCGCAGGAGGAGGCAACACTTGCATTGGAGCTCATTGTTACAGGCTGGTATTCATAATCATGACTGCAGCTTGTATTGTTGGGTTCTTGTTAGACATTCTATTATCAATCAGAACAAAGAATGTTTACCACAAGATTTCCTTGAGCAAAAAATCCAAGAAATCCTCACAGACATCAAGTAGTCGATGA 1635 0.493 MGSEVGDVSTASKWLGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQIQLNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSIEGLIGYGVQWLVVSHRIQPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPASFLIMLSVVPFAVCLTGVFFLREVPPADSTAAQDKEESRYFGLFNAVAVVVAVYLLVYGFVPNPSSLVSRVFAVVLLLLLAAPLGIPVYSYFKARFKPGLDIEGRVTEPLIRSQEEGNETEADNRVDKETEVIRRGPVVGEEHTIVEALKTLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSIFVSLTSIWGFFGRIISGSVSEYFIKKAATPRPLWNAASQIVMAVGYILLALAMPGSLYIGSTIVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCIGAHCYRLVFIIMTAACIVGFLLDILLSIRTKNVYHKISLSKKSKKSSQTSSSR. 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00097 544 Pfam Nodulin-like 13 260 IPR010658 -
Seca3g00097 544 SUPERFAMILY MFS general substrate transporter 16 523 IPR036259 -
Seca3g00097 544 CDD MFS_Mch1p_like 12 510 - -
Seca3g00097 544 Gene3D MFS general substrate transporter like domains 320 524 IPR036259 -
Seca3g00097 544 Gene3D MFS general substrate transporter like domains 11 208 IPR036259 -
Seca3g00097 544 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00097 Seca-Chr3 1554743 1557468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00097 11 537 Nodulin-like Gene Family AT4G34950 70.909 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00097 - - gmx:100813607 812.757