Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00089 ATGGCTAAAATTGTGGTGAATGCAACTTCCCCACTACTTCTCTGCATCCTCCTCTTTACTTCACTCTCCCAATGTTTAGCTTTTCCCAAAACCTTCATCTTCAGGATTGATTCTGAATCCAAGCCTTCCATCTTCCCCACTCACTACCACTGGTACACCTCTGAGTTCACCGAACCAACCCGTATCCTCCATCTCTACGACACCGTTTTCCACGGCTTCTCTGCGCTTCTCACCCAACAACAAGTTGCTTCCCTCAGCCAGCACCCCTCCGTCCTCGCCATCTTCGAGGATCATCGCCGCGAGCTTCACACCACTCGCTCCCCTCAGTTCCTTGGCCTGCGAAACCAGCGTGGTCTTTGGTCCCAATCCGATTACGGTTCCGACGTCATTATCGGCGTCTTCGACACCGGAATTTGGCCTGAGCGCCGGAGCTTCAACGATTTCAATTTAGGCCCTATTCCTCGCCGCTGGAAAGGGGTTTGCGAGTCAGGGATCAAATTCTCTGCCACTAACTGTAACAGGAAGTTGATCGGTGCTAGATTTTTCTCCAAAGGTCACGAGGCAAGTAGCGGTTTCATCAACGACACCATCGAATACCGTTCGCCTCGTGACGCTGATGGCCATGGGACCCACACAGCATCAACTGCAGCGGGTCGTTACGTTTTCAAAGCCAGCATGGAAGGCTATGCTTCCGGAATCGCAAAAGGCGTTGCTCCAAAAGCCCGTTTGGCTATGTACAAGGTGTGCTGGAAGAATTCAGGTTGCTTTGATTCTGACATTCTCGCTGCGTTCGACGCCGCCGTAGCCGACGGCGTCGACGTCATTTCTATATCCATTGGCGGCGGAGATGGCGTTTCCTCACCTTACTATCTGGACCCTATTGCAATTGGCTCTTATGGTGCAGTTTCCAGAGGAGTTTTTGTTTCCTCTTCCGCCGGCAATGATGGACCTAGTGGAATGTCAGTAACCAACCTTGCTCCATGGTTGACCACCGTCGGAGCAGGCACCATTGATCGGGATTTCCCCGCAGAGGTGGTATTAGGCGATGGTCGGAGACTCTCCGGCGTGTCTCTATACTCTGGAGCGCCATTGAAGGGTCAAATGTATGAACTGATTTACCCAGGAAAATCAGGGGTTCTTGTGGATTCACTGTGCATGGAAAATTCCCTGGATCCCAATGTTGTGAAGGGGAAGATAGTAGTCTGCGATCGTGGAAGCAGCCCCAGAGTTGCGAAAGGGATGGTGGTGAAGAAAGCCGGTGGTGTGGGAATGATTCTGGCAAATGGTGTGTCTAATGGTGAAGGTCTTGTTGGTGATGCTCATCTTCTTCCCACGTGTGCCCTTGGTGCTGATGAAGGAGATGTTATCAAAGCATATATCTCATCCTCTGAGAATCCCACAGCCACCATTGATTTCAAAGGCACTGTATTAGGAATCAAACCTGCGCCGGTTTTGGCGTCGTTTTCTGCCAGAGGACCCAATGGGTTGAACCCGGAGATACTTAAACCGGATTTGATTGCTCCTGGAGTCAACATTCTCGCTGCCTGGACTGATGCTGTTGGTCCTTCTGGTCTTGATTCTGATATGCGAAAGAGTGAGTTCAATATCATGTCAGGTACTTCAATGGCTTGTCCTCATGTGAGTGGTGCTGCTGCGTTGTTGAAATCTGCGCATCCTAATTGGAGCCCAGCTGCTATAAGGTCAGCGATGTTGACAACTGCGACCCTTGTTGACAATAAAAACCAGTCCATGATGGATCAAGCCACTGGGAAAGATTCCACACCCTATGATTTCGGTGCTGGACATCTCAATTTGGGTCTTGCTATGGACCCTGGTTTGGTATATGATATCACGGACAATGATTATGTCAACTTTTTATGTGGTATTGGTTATGGGCCCAAGTTAATTCAGGTGATTACTCGATCACCGCCGAATTGTCCGGCGAGGAAGCCGTTGCCGGAGAATCTGAATTACCCGTCGTTTGTTGCTCTGTTTCCAGTGTCGTCGAGAGGGTTGTCGAGAAAGACGTTCATCAGGACGGTGACGAATGTGGGAGCGGCGAACTCGGTTTACAGGGTGAGGGTGGAGTCGCAGGCCAAGGGGGTGAGGGTGAGGGTGAGGCCGTCGCAGCTTGTGTTCTCGGAGGCTGTGAAGAAGCGTAGTTTTGTGGTGACGGTTACGGCGGATACCCGGAATCTGGTGATGGGTCAGTCAGGGGCAGTGTTTGGATCGCTTTCATGGACGGATGGAAAGCATGTGGTGCGGAGTCCCATTGTTGTTACTCAAATTGAAGCCTTATAA 2301 0.508 MAKIVVNATSPLLLCILLFTSLSQCLAFPKTFIFRIDSESKPSIFPTHYHWYTSEFTEPTRILHLYDTVFHGFSALLTQQQVASLSQHPSVLAIFEDHRRELHTTRSPQFLGLRNQRGLWSQSDYGSDVIIGVFDTGIWPERRSFNDFNLGPIPRRWKGVCESGIKFSATNCNRKLIGARFFSKGHEASSGFINDTIEYRSPRDADGHGTHTASTAAGRYVFKASMEGYASGIAKGVAPKARLAMYKVCWKNSGCFDSDILAAFDAAVADGVDVISISIGGGDGVSSPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAEVVLGDGRRLSGVSLYSGAPLKGQMYELIYPGKSGVLVDSLCMENSLDPNVVKGKIVVCDRGSSPRVAKGMVVKKAGGVGMILANGVSNGEGLVGDAHLLPTCALGADEGDVIKAYISSSENPTATIDFKGTVLGIKPAPVLASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPSGLDSDMRKSEFNIMSGTSMACPHVSGAAALLKSAHPNWSPAAIRSAMLTTATLVDNKNQSMMDQATGKDSTPYDFGAGHLNLGLAMDPGLVYDITDNDYVNFLCGIGYGPKLIQVITRSPPNCPARKPLPENLNYPSFVALFPVSSRGLSRKTFIRTVTNVGAANSVYRVRVESQAKGVRVRVRPSQLVFSEAVKKRSFVVTVTADTRNLVMGQSGAVFGSLSWTDGKHVVRSPIVVTQIEAL. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00089 766 CDD Peptidases_S8_3 101 575 IPR034197 -
Seca3g00089 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Seca3g00089 766 FunFam Subtilisin-like protease SBT1.5 128 351 - -
Seca3g00089 766 SUPERFAMILY PA domain 395 465 IPR046450 -
Seca3g00089 766 Pfam Subtilase family 126 586 IPR000209 GO:0006508|GO:0008236
Seca3g00089 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 103 IPR037045 -
Seca3g00089 766 Gene3D Peptidase S8/S53 domain 128 622 IPR036852 GO:0004252|GO:0006508
Seca3g00089 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 760 IPR045051 -
Seca3g00089 766 FunFam subtilisin-like protease SBT1.5 338 477 - -
Seca3g00089 766 Pfam Fibronectin type-III domain 655 760 IPR041469 -
Seca3g00089 766 SUPERFAMILY Subtilisin-like 102 613 IPR036852 GO:0004252|GO:0006508
Seca3g00089 766 ProSiteProfiles Serine proteases, subtilase domain profile. 99 609 - -
Seca3g00089 766 Gene3D - 626 763 - -
Seca3g00089 766 FunFam Subtilisin-like protease SBT1.5 626 763 - -
Seca3g00089 766 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Seca3g00089 766 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Seca3g00089 766 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Seca3g00089 766 Gene3D - 338 477 - -
Seca3g00089 766 Pfam Peptidase inhibitor I9 45 103 IPR010259 -
Seca3g00089 766 CDD PA_subtilisin_like 345 470 - -
Seca3g00089 766 Pfam PA domain 380 454 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00089 Seca-Chr3 1419753 1422053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00089 8 766 Subtilisin-like Serine Gene Family AT4G34980 73.595 0.0 1183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00089 - - gmx:100817537 1276.54