Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00083 ATGTCAAGCCACCAAGACGACCTGGATCTCCTGCTTTCCCTTCAGGATAGGGTTCCTGAAACCCCTCCTGCTTCTCCCTCCCCAGCAGGTTACCTGTCCGATTCCGATGGGTCTCCCAAGCAAATGGAGAAACCCGATATGTCTGTATTTAAAAATGCTGTTGAAGATTGCCTTTCTTACCATCCCCCTAATCCTAATCCTAACCCTAATCCTAAACCAAAATCCAAACCTCCTCTCACCAACGATGCCAACGTTGACAAGTTTTCTGGTCTTCGAATAAGGAACCAATTGTTAACCCCTGCTGAGCTTAGGGAATCCTTTTCAGACATTCGTTTTGTTCGGCTATCAGTTATCAAGAATTTGTTGATTGGGGATACTTTTTCCGGAAGTTGGGTGACTGTTGGAGTGTTGACCGAGAAGGGGATTCAGAAAACAAGTTCCACAGGGAAGAGCTATTGTATATGGAAAATTGGGTGTTTGGATGAAAGTACTGTTTCTCTTTTCCTGTTTGGTGATGCTTATCAAAGGAATATGCAAGAGCAGGCAGGAACGGTCTTTGCACTCTTTAACTGTGCTGTCCGCAAGGATGCCAAGGTATTTGGTTGTTATGGGTTGGTTAGATTCTGA 627 0.4466 MSSHQDDLDLLLSLQDRVPETPPASPSPAGYLSDSDGSPKQMEKPDMSVFKNAVEDCLSYHPPNPNPNPNPKPKSKPPLTNDANVDKFSGLRIRNQLLTPAELRESFSDIRFVRLSVIKNLLIGDTFSGSWVTVGVLTEKGIQKTSSTGKSYCIWKIGCLDESTVSLFLFGDAYQRNMQEQAGTVFALFNCAVRKDAKVFGCYGLVRF. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00083 208 PANTHER PROTEIN MCM10 HOMOLOG 23 198 IPR040184 GO:0003690|GO:0003697|GO:0006270
Seca3g00083 208 MobiDBLite consensus disorder prediction 1 85 - -
Seca3g00083 208 Gene3D - 77 206 IPR012340 -
Seca3g00083 208 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00083 Seca-Chr3 1241337 1242517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00083 17 196 Core DNA Replication Machinery Family AT2G20980 59.669 2.50e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00083 K10736 - gmx:100527758 267.314