Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00068 ATGAAAGAGAAAGTTCTCTTCGTGAAGAATAATGCTATTGTAGTATGCCGTGATCAGGATAATAACATGATATGCATTGAGAAGTTCTCTAATTTTCCGCAACTAGGGAGGTTCACTCTTCGCACTAAAGGAAAAACTGTCGTTGTGGGGAAAGTCACTGGTCTGTGA 168 0.3988 MKEKVLFVKNNAIVVCRDQDNNMICIEKFSNFPQLGRFTLRTKGKTVVVGKVTGL. 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00068 55 Gene3D Translation factors 1 55 - -
Seca3g00068 55 Pfam Elongation factor Tu C-terminal domain 2 54 IPR004160 -
Seca3g00068 55 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 2 54 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00068 Seca-Chr3 1049559 1049726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00068 22 53 Eukaryotic Initiation Factors Gene Family AT5G10630 53.125 5.50e-06 39.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00068 K03267 - jre:108997765 75.485