Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00047 ATGAGTGGCGGAGGTGGAGAGGAAGAGACAACACTTGAGTTCACTCCAACATGGGTTGTGGCTGCCGTTTGCACTGTCATCGTCGCCATTTCCCTTGCCGCTGAGCGTTTCCTTCATTATGGCGGAAACTTTCTTAAAAGCAAGGACCAAAAGCCTCTCTACGAAGCTCTCCAGAAGATCAAAGAAGAGCTTATGCTGCTGGGTTTTATTTCTCTGCTTTTGACGGTTTCGCAAAACGGCATCACCAAAATCTGCGTTCCACCCAATTTCACGCGTCATATGCTTCCTTGTAGTCTTGAAGACGCTGAAAAGAAGCCTGAATCCCTTTCCCATTTTGTTTTTTCTTTTCCTGGACTTGCCAGGCGCCTTCTCGCTCATGGCGACCAGGAGAACCACACATCATCGGACCCTGAAATCCCTTACTGTGCTCGCAAGAACAAGGTACCTTTGCTATCTGTGGAAGCACTGCATCATCTCCACATCTTTATTTTTGTCCTCGCCATTGTTCATGTCACCTTTTCCGTTCTCACCGTTGTTTTTGGAGGTGCAAGAATACGTCAGTGGAAGCACTGGGAAGATGCAATTGCAAAAGAGAACTATGAAACTGCGCGAGCAGTTCTCAAACCGAAGGTGACTCATGTTCACCAGCATGATTTTATCAAGGGTCGCTTTTCGGGTTACGGCAAAGACTCTGCATTAATGGGTTGGTTGAAATCCTTTTTCAAGCAATTTTATGGATCAGTGACAAAATCAGATTATGTGACATTACGGCTTGGTTTCATTATGACCCATTGCAAGTCAAATCCAAAGTTTAATTTTCACAAGTACATGATTCGTGCCCTTGAAGATGATTTCAAGCAAGTTGTTGGCATAAGTTGGTATCTTTGGCTCTTTGTGGTCATCTTCTTGTTGCTTAATATCAATGGTTGGCATACATATTTCTGGATTGCCTTCATTCCTTTTATTCTTTTACTTGCTGTGGGCACTAAGCTGGAGCATGTAATAACCCAACTTGCTCATGAAGTAGCTGAAAAGCATGCAGCCATAGAAGGTGATTTAGTTGTTCAACCATCAGATGAGCACTTTTGGTTTCATCGACCCCACATTGTCCTCCTGTTGATTCACTTCATCCTTTTCCAAAATGCTTTTGAGATAGCATTTTTTTTCTGGATATGGTTGTGTTCTCAGGTTACATACGGATTTGATTCCTGTATAATGGGACAAGTTGGTTACATTGTTCCAAGGCTCATTATTGGGGTATTTATTCAGGTACTATGTAGCTACAGCACTCTACCTCTCTATGCAATTGTTACACAGATGGGGACTCACTATAAGAGGGCAATATTTAATGAGCATGTGCAAGTGGGTATTGTTGGTTGGGCACAAAAGGTTAAGAAGAAGAAAGGGCTAAAAGCTGATGATACCCAGCATGCCCAAGGAAGTTCAAATGAGGGTGCCAATGCTGGAATTCAGCTTGGTTCAATTTTCCCGAAGAGGGCATCGGCGCCCGCAGACAATACTTCTGTCCCCAAAGCTGACGGGTCCAACTGA 1551 0.4371 MSGGGGEEETTLEFTPTWVVAAVCTVIVAISLAAERFLHYGGNFLKSKDQKPLYEALQKIKEELMLLGFISLLLTVSQNGITKICVPPNFTRHMLPCSLEDAEKKPESLSHFVFSFPGLARRLLAHGDQENHTSSDPEIPYCARKNKVPLLSVEALHHLHIFIFVLAIVHVTFSVLTVVFGGARIRQWKHWEDAIAKENYETARAVLKPKVTHVHQHDFIKGRFSGYGKDSALMGWLKSFFKQFYGSVTKSDYVTLRLGFIMTHCKSNPKFNFHKYMIRALEDDFKQVVGISWYLWLFVVIFLLLNINGWHTYFWIAFIPFILLLAVGTKLEHVITQLAHEVAEKHAAIEGDLVVQPSDEHFWFHRPHIVLLLIHFILFQNAFEIAFFFWIWLCSQVTYGFDSCIMGQVGYIVPRLIIGVFIQVLCSYSTLPLYAIVTQMGTHYKRAIFNEHVQVGIVGWAQKVKKKKGLKADDTQHAQGSSNEGANAGIQLGSIFPKRASAPADNTSVPKADGSN. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00047 516 Pfam Mlo family 10 483 IPR004326 GO:0006952|GO:0016020
Seca3g00047 516 PANTHER MLO-LIKE PROTEIN 1 8 486 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00047 Seca-Chr3 680632 685977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00047 4 485 MLO family AT4G02600 71.690 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00047 K08472 - gmx:100785800 825.469