Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00017 ATGGAGGGCTCAAAGGAAAACCATCTGGTTCCGCTTCCTCCCATACTCTCTTCAAATGTTCAAGGCCGTTCAAGAAGGGAGGGTGTCAGTGTCAAACTCGGGAAGGGGATGAGACACCATCACCGGCTGCCTCTCAGCAAAGTCAATGACAATATTATGCCATGTACAGCGCAGACAGTTCAGCACTACTCTAAAGAAACAAAGAACCAGAACCTATTGGCCCCAACTCCAGCTTACCGGTTAGATTGTGCTATCATAGATACCGATGAATATGAGGATGACAGTGGTAATGCGGTTCCAGCATTTGTGAAACACACTGAAGCAATGCTAGACGAAATTGACAGAATAGAGGAAGTTGAAATGGGAGATGTGGAGGAACCTGTTATGGACATCGACGCCTGTGACAGGAATGATCCACTTGCAGTTGTTGAGTACATAGATGATATCTACCGTTTCTACAGGGAAACTGAGAAATCCAGCTGTGTCTCTCCAAATTACATGACTTGTCAGTTTGACATTAATGAGAAGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTATTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTAATCAGAAAGAAGCTTCAGTTGGTTGGTGTAACAGCCATGCTTATAGCTTGTAAGTATGAGGAGGTAGCAGTCCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATACACACGAAATGAAGTTTTAATTATGGAGAAGTTAATGGTGAATATCTTGCAATTCAACTTGTCTGTGCCTACTCCATACGTATTCATGAGAAGATTTCTTAAGGCAGCTCATTCCGACAAAAAGGTGAGTAATGTAACATTGTTTTGCAAATATAAACTCTAA 921 0.4224 MEGSKENHLVPLPPILSSNVQGRSRREGVSVKLGKGMRHHHRLPLSKVNDNIMPCTAQTVQHYSKETKNQNLLAPTPAYRLDCAIIDTDEYEDDSGNAVPAFVKHTEAMLDEIDRIEEVEMGDVEEPVMDIDACDRNDPLAVVEYIDDIYRFYRETEKSSCVSPNYMTCQFDINEKMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVAVPTVEDFILITDKAYTRNEVLIMEKLMVNILQFNLSVPTPYVFMRRFLKAAHSDKKVSNVTLFCKYKL. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00017 306 ProSitePatterns Cyclins signature. 178 209 IPR006671 -
Seca3g00017 306 Gene3D - 148 300 - -
Seca3g00017 306 CDD CYCLIN_AtCycB-like_rpt1 125 271 - -
Seca3g00017 306 MobiDBLite consensus disorder prediction 1 27 - -
Seca3g00017 306 SMART cyclin_7 183 267 IPR013763 -
Seca3g00017 306 Gene3D - 162 274 - -
Seca3g00017 306 FunFam G2/mitotic-specific cyclin 162 274 - -
Seca3g00017 306 PANTHER CYCLINS 100 286 IPR039361 -
Seca3g00017 306 SUPERFAMILY Cyclin-like 137 273 IPR036915 -
Seca3g00017 306 Pfam Cyclin, N-terminal domain 148 274 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00017 Seca-Chr3 318107 321155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00017 85 301 Core Cell Cycle Gene Families AT1G20610 66.667 2.16e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00017 K21777 - gmx:100812029 416.387