Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00016 ATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTGTTGGTTCGCGATGATGGTCACATAATGCTCTCAGATTTTGATCTCTCCCTCCGGTGTGCCGTTTCACCAACTCTTAGAACTTCCTACGATAGTGACCCTTCAAAACGGGCAGCTGGTGGTGCATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAGTATGTATCCAACCTGCATGTTTTATTCCTAGGTTATTTCCTCAGAAAAACAAAAAGTCGCGGAAGCCAAGAGCTGAACCTGGATTGCCTTCAATGACCCATATCTTTTTTTTTTTCAGGTTGCCTTAA 330 0.4303 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLRTSYDSDPSKRAAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAEPGLPSMTHIFFFFRLP. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00016 109 SUPERFAMILY Protein kinase-like (PK-like) 3 43 IPR011009 -
Seca3g00016 109 PANTHER FLIPPASE KINASE 1-RELATED 1 91 - -
Seca3g00016 109 Pfam Protein kinase domain 3 37 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00016 109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Seca3g00016 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g00016 109 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00016 Seca-Chr3 257979 258308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00016 1 93 AGC Kinase Gene Family AT2G44830 75.258 1.92e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca3g00016 Pkinase 3.5e-08 CL0016