Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00014 ATGAAAAGCTTATACGGACTCACTGTTACAGGGAGACGCAGGAACTTCGCGCTTGACGAATCCACGGAGATCAGTGGCGTTCTTGCTCGGAACGGTGGAGCGACGTGGTTCTCGTGGAAGACTGAAAGGGACGATGGCTTCAGAACGGTGGCGCGCTCGGTCGTGGTCTCAGACACAGTGGAAGCGAAGACAGGCACAACGTTCGTCTTGCTCGTGGAAGGGAAGATGGCTTCAGAACGGTGGCGCCGCCGTGGTAACAGTGGGGAAGGGAAGGTGGAAGGACATGTGGAGACGAAAATCCGAGACATGCAGAAGCACTTGCTGACGGAGCGTTTGAGGAAGGGGAAGATAAAACACTATGCCAAGGCTAAGATCCCACTGAGTGTGTTATGGTTGGTGCCACAATTCTTCATTGTGGGTTTTCCGAACTCAGCAAGGAGCCCTCAAGACGAAGACGTTGAAGCCCAAAGTGGTTGGAGAGGACATGGCAGAAGGAAAGTGTCATCTGTGTTCAACCTGCATTTATTGAGCCAGCATCAGTATGCATCCAACCTGCATGTTTTATTCCTAGGTTCTTTCCTCATAAAAACAAAAAGTCACGGGAGCCAAGAGCTGAACCTGGATTGCCTTCCAACACATGCACTTCCAAAGCTTGTTGCTGAGCCTACTTCAGCTCGATCTATGTCCTTTGTGGGCACCCATGAATACCTTGCCCCTGAAATTATTAAAGGGGAAGGCCATGGCAGTGCAGTTGATTGGTGGACATTTGGAGGTTTTGAGAAAATTAATTTCTTAACTTAA 801 0.4969 MKSLYGLTVTGRRRNFALDESTEISGVLARNGGATWFSWKTERDDGFRTVARSVVVSDTVEAKTGTTFVLLVEGKMASERWRRRGNSGEGKVEGHVETKIRDMQKHLLTERLRKGKIKHYAKAKIPLSVLWLVPQFFIVGFPNSARSPQDEDVEAQSGWRGHGRRKVSSVFNLHLLSQHQYASNLHVLFLGSFLIKTKSHGSQELNLDCLPTHALPKLVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGGFEKINFLT. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00014 266 Gene3D Transferase(Phosphotransferase) domain 1 225 257 - -
Seca3g00014 266 PANTHER FLIPPASE KINASE 1-RELATED 204 257 - -
Seca3g00014 266 SUPERFAMILY Protein kinase-like (PK-like) 225 257 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00014 Seca-Chr3 243100 245565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00014 215 259 AGC Kinase Gene Family AT4G26610 95.556 4.88e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca3g00014 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00014 - K08286 pda:103697871 99.7525