Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05679 ATGACCAAGATCAAACAAGCCTCCAATAATAAGAAGAAGAAGCTGATCTTCTTCTCTCTCTTTGCTACTTTGCTACTTTGCAACAATGCCGAGTCCTCCTCCCCATCCCATGTCATCATAAAAAACGCTTGCAGCAACACATTGTACCCAGAATTGTGCATCTCAACAATAGCCTCTGAACCTCGACTTGCCAAGAAAGTTTCCAGTCACAAAGATGTGGTAGAGTTGTACTTGAACGTAACCACCGGAATTGTTCAGCGCAATTACTTCACCGTAGAGAAGCTCTTAACCAGAAAGGGCCCCACCCTCACCAAGAGGCAGAAAACCGCCCTCCATGATTGCTTGGAAACCATTGATGAGACCCTCTATGAGCTAGGAAAGGCCAAGGATGACCTCAGAGATTACCCATCGAAAAAGTCTCTGTCTCAGCACGCGAATGATCTCATAACTCTGATGAGTTCCGCCATAACATACCAAGATACTTGCTTGGATGGTTTCTCTCATGATGAGGCTGATAGAAAGCTCAGGAAATATCTGGAGAAAGGGGAACTGCATGTGGAACACTTGTGCAGCAACGCATTGGTTATGATCAAGAACCTCACCGACACTGACATAGCTAATTCCCAGAACAACAGGAAACAACTGATGGAGCAGGAGGAGGATGGGATCAAGTGGCCCGAGTGGATTTCCGCCGCGGACAGGCGCCTTCTACAGGCGGCTGCGGTGACTCCTGACGTGGTCGTGGCGGCGGACGGCAGCGGGAACTTCAAGACAGTGTCAGCTGCGGTGGCTGCAGCTCCAGAGAAGAGTAACAAGAGATATGTAATCAAAATAAAAGCAGGGGTGTACAGAGAGAATGTGGATGTGCCAAAGACGAAGACGAATATCATGTTTGTGGGTGACGGCAGAACCAACACGATCATCACAGCAAGTAGAAATGTTGTCGATGGCAGCACTACCTTCAACTCTGCCACAGTGGCCGTAGTGGGAGAACGATTCTTGGCACGAGACATAGGTTTCCAAAACACAGCAGGTCCCTCAAAGCACCAAGCAGTGGCCCTTCGAGTTGGTGCTGACCTCTCTGCCTTCTATTTGTGTGACTTCCTTGCATACCAAGACACCCTTTATGTCCACAGCAATCGCCAATTCTTTGTCAAGTGCTTCATTGCAGGCACTGTCGACTTCATCTTTGGCAATTCAGCTGTTGTGTTCCAAGACTGTGACATCCACGCCAGGCGTCCTAATTCAGGGCAAAAGAACATGGTGACCGCACAAGGCCGTGTTGACCCTAACCAAAACACAGGCATTGTGATCCAAAAATGTAGGATTGGTGCCACCAAGGATTTGGAACCTGTCAAGAGCAGCTTCCCTACGTTTCTTGGGAGGCCATGGAAGGAGTACTCTAGGACTGTCATCATGCAATCAACCATAAGTGATGTCATTAACCCTGCTGGCTGGCATGAATGGGATGGCAATTTTGCTTTGAATACCTTGTTTTATGGGGAGTATCAGAACACTGGTGCTGGTGCTGCCACCTCTGGAAGGGTTAAATGGAAAGGGTTTAAGGTCATTACCAGTGCTTCTGAGGCCCAAGCTTTTACTCCTGCCAATTTCATTGCAGGTTCTAGTTGGTTGAGCTCTACTGGATTCCCATTCTCTCTTGGCCTATAA 1671 0.4817 MTKIKQASNNKKKKLIFFSLFATLLLCNNAESSSPSHVIIKNACSNTLYPELCISTIASEPRLAKKVSSHKDVVELYLNVTTGIVQRNYFTVEKLLTRKGPTLTKRQKTALHDCLETIDETLYELGKAKDDLRDYPSKKSLSQHANDLITLMSSAITYQDTCLDGFSHDEADRKLRKYLEKGELHVEHLCSNALVMIKNLTDTDIANSQNNRKQLMEQEEDGIKWPEWISAADRRLLQAAAVTPDVVVAADGSGNFKTVSAAVAAAPEKSNKRYVIKIKAGVYRENVDVPKTKTNIMFVGDGRTNTIITASRNVVDGSTTFNSATVAVVGERFLARDIGFQNTAGPSKHQAVALRVGADLSAFYLCDFLAYQDTLYVHSNRQFFVKCFIAGTVDFIFGNSAVVFQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEPVKSSFPTFLGRPWKEYSRTVIMQSTISDVINPAGWHEWDGNFALNTLFYGEYQNTGAGAATSGRVKWKGFKVITSASEAQAFTPANFIAGSSWLSSTGFPFSLGL. 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05679 556 PANTHER PECTINESTERASE 27 546 - -
Seca2g05679 556 FunFam Pectinesterase 239 556 - -
Seca2g05679 556 SMART PMEI_2 35 196 IPR006501 GO:0004857
Seca2g05679 556 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Seca2g05679 556 Pfam Plant invertase/pectin methylesterase inhibitor 40 196 IPR006501 GO:0004857
Seca2g05679 556 FunFam Pectinesterase 36 201 - -
Seca2g05679 556 NCBIfam pectinesterase inhibitor domain 16 201 IPR006501 GO:0004857
Seca2g05679 556 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Seca2g05679 556 Gene3D - 239 556 IPR012334 -
Seca2g05679 556 CDD PMEI-like_3 43 201 - -
Seca2g05679 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Seca2g05679 556 SUPERFAMILY Pectin lyase-like 240 555 IPR011050 -
Seca2g05679 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05679 Seca-Chr2 142945909 142948885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05679 28 556 Carbohydrate Esterase AT3G14310 70.054 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05679 K01051 - pvy:116110447 816.994