Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g05671 | ATGATGATCACCATCCTCATCATCTTCCTAGTCACAGCAGCTACAGCCATTGTTGTTGTGATCTCAAAGTACTCCTTTAAAAAATATACAATATTCCAAAGCTTATTGCATAAACTACTGTATTATTATAAGAGTAATGGTGATGCAGGGAAGGAGAATGTTTCAGAAGAAGAAGATTGGTGTGCAGTGTGTCTATGCCAAGTGTCAGAGGGAGGAAAGGTACAGTCACTACCTGGATGCTACCACAGTTTTCATGCTGACTGTATTGGTGCCTGGTTGAAGGAACACAACAGCTGCCCTCTTTGTAGGAACAAAATCAATGACCATCATATCCCCTACAATCACAAAGTCAATATCATTGATTTGTTTCAGAGTTTCTCTGATCTATTCATAGCTCTTATCTACATCACGCTTCCACCTAGCATCCGTCAGACTTTCCCTTTGCTCACTCAAACTCAATATTGA | 465 | 0.4 | MMITILIIFLVTAATAIVVVISKYSFKKYTIFQSLLHKLLYYYKSNGDAGKENVSEEEDWCAVCLCQVSEGGKVQSLPGCYHSFHADCIGAWLKEHNSCPLCRNKINDHHIPYNHKVNIIDLFQSFSDLFIALIYITLPPSIRQTFPLLTQTQY. | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g05671 | 154 | SMART | ring_2 | 61 | 102 | IPR001841 | - | |
Seca2g05671 | 154 | Pfam | Ring finger domain | 60 | 103 | IPR001841 | - | |
Seca2g05671 | 154 | ProSiteProfiles | Zinc finger RING-type profile. | 61 | 103 | IPR001841 | - | |
Seca2g05671 | 154 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 26 | 109 | IPR013083 | - | |
Seca2g05671 | 154 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 33 | 107 | IPR044675 | - | |
Seca2g05671 | 154 | SUPERFAMILY | RING/U-box | 54 | 109 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g05671 | Seca-Chr2 | 142882995 | 142883459 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca2g05671 | 25 | 106 | C3H Transcription Factor Family | AT3G18930 | 39.080 | 4.87e-15 | 69.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g05671 | - | - | gmx:100500375 | 126.331 |