Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05665 ATGTGTCATAATGCAGAAGCAAAGTCTGTGCAAACTACTACCTCTGTAATTGACTTGAAGACGTTTGATACTTCTGCCTCAATAAATCTTAAACCTCCACCTTTTGATCGTCATAAATCATTTGATGACAATGAATTCTCAAAGAAGCCTGCTGTTGTTAAGAAGACTGTAACAGCTCCTGCAGATGTGCAATTGTATTCTATTGCTGATCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATTATCTTGTTGGTGAGGGATCTTTTGGGCGCGTTTACCGTGCTCAGTTCGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAGTGATTTGTCAGAAGATTTTACAGAAATAGTGTCAAACATCTCCCATTTACATCATCCAAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGTATGGACAACACCTCCTAGTCTACGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTTTGGGGACTGCGCGAGCTTTAGAGTACCTACATGAAGTTTGTTCGCCGTCAGTTGTTCATAAGAATATTAAATCAGCCAATATATTACTTGATACAGAGCTTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCGGACCAGGTGATTTTATATGTTTTTGGAAATTTATGTTGTGAATTAATGTTTGTATAA 759 0.3834 MCHNAEAKSVQTTTSVIDLKTFDTSASINLKPPPFDRHKSFDDNEFSKKPAVVKKTVTAPADVQLYSIADLQIATGSFSVDYLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPSDLSEDFTEIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQVILYVFGNLCCELMFV. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05665 252 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Seca2g05665 252 Gene3D Transferase(Phosphotransferase) domain 1 157 240 - -
Seca2g05665 252 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 42 155 - -
Seca2g05665 252 Pfam Protein tyrosine and serine/threonine kinase 83 236 IPR001245 GO:0004672|GO:0006468
Seca2g05665 252 SUPERFAMILY Protein kinase-like (PK-like) 61 246 IPR011009 -
Seca2g05665 252 PANTHER OS01G0253100 PROTEIN 44 235 - -
Seca2g05665 252 ProSiteProfiles Protein kinase domain profile. 78 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05665 252 Gene3D Phosphorylase Kinase; domain 1 40 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05665 Seca-Chr2 142849070 142850632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05665 6 238 Strubbelig Receptor Gene Family AT1G53730 73.077 6.78e-122 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Seca2g05665 PK_Tyr_Ser-Thr 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05665 - - gmx:100807707 417.157