Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05664 ATGCTGGAGGTTCGAAGGTTGCTGCTGATGCTGTTCATCAGCACTTGCATTCTTCGTTGGATGCCCAATGGTGTCACTGCCACAGATCCAAATGATGTTGCTGCTGTGAAGGCTATGTTTCAAAGCATGAACTCACCATCCCAGCTAGGTTGGCCTGCTAATGGTGATGATCCCTGTGCACAGTCCTGGAAAGGCATCACTTGTTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGAACATTGGCCTATGGATTACAAGCTTTAACATCTGTGACCACCCTAGACATGAGTAACAACAATCTTGTAGGAACTATACCATACCAACTTCCTCCAAATGTGCAGCGCCTAAATCTTGCTTATAATAACCTTACTGGGACAGTTCCTTACTCAATTTCTAGCATGGCCTCTCTTACAGACCTGTGTGAATCTCGGTCACAATCAGCTCCAGCAAGGACTGGGTGTCGACTTTCAAAATCTTTCTTCCCTCTCCAAATTGTGAGATTTCCTCCTACCTTTCAACATTATAAAAAAGTAGTCTTAGATGGCTGTCAAGGATCTCTCTTTCAATTCTCTGACAGGTATCTGCAAAGCAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCCCTGGATAGTCTGAATGTGGAAAACAATCATTTTACAGGATGGATACCAGAACAGTTGAAAAACATTGACCTACAGACTGGTGGCAATGCATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGCACCTAAGAGCAACCAACACCATAAATCTGGTGGTGGAAGTACCACTGTCCAAGATGCTGGCAGTGGCACAATTGATGAGGGCAAAAAATCTGGAATAGGGGTTGGTAGCATAGCTGGAATTGTGATCTCCATCATTGTTGTTGGGGCAATAGTAGCATTCTTTTTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAGCTGGGCAATCAGTCCTTTGCTCCTCTTCCTTCAAATGAAGTGCATGTTATATCTGCAGAAGCCACTTATTCTATTGATGGTTCTTATACTTGA 1089 0.4408 MLEVRRLLLMLFISTCILRWMPNGVTATDPNDVAAVKAMFQSMNSPSQLGWPANGDDPCAQSWKGITCSGNRVTEIKLSNLGLTGTLAYGLQALTSVTTLDMSNNNLVGTIPYQLPPNVQRLNLAYNNLTGTVPYSISSMASLTDLCESRSQSAPARTGCRLSKSFFPLQIVRFPPTFQHYKKVVLDGCQGSLFQFSDRYLQSNQFTGTIDVLANLPLDSLNVENNHFTGWIPEQLKNIDLQTGGNAWSSGPAPPPPPGTPPAPKSNQHHKSGGGSTTVQDAGSGTIDEGKKSGIGVGSIAGIVISIIVVGAIVAFFLVKRKSKKSSSDLEKLGNQSFAPLPSNEVHVISAEATYSIDGSYT. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05664 362 MobiDBLite consensus disorder prediction 250 264 - -
Seca2g05664 362 SUPERFAMILY L domain-like 28 237 - -
Seca2g05664 362 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 259 - -
Seca2g05664 362 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 75 327 - -
Seca2g05664 362 MobiDBLite consensus disorder prediction 243 291 - -
Seca2g05664 362 Gene3D Ribonuclease Inhibitor 173 250 IPR032675 -
Seca2g05664 362 Gene3D Ribonuclease Inhibitor 32 167 IPR032675 -
Seca2g05664 362 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Seca2g05664 362 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05664 Seca-Chr2 142843722 142848316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05664 1 347 Strubbelig Receptor Gene Family AT3G14350 48.056 2.08e-77 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05664 - - gmx:100807707 424.861