Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05625 ATGTCGCTTAGAGAGATTGCTTGTGCTTACGCTGCTCTCATCCTTCATGAAGATCGCATCGCTGTCACTGCTGAGAATATCTCTACCTTGTTGAAAACTGCAAAAGTTAAAGTAGAATCGTATTGGCCTACCTTATTTGCTAAACTTGCTGAGATGAAAAATCTTGAAGATTTGATAGCCAGTGCTGGCGGCGGTGGGGCTCCGGTTGCCGTTGCAGCCGCCCCTATTGCTGCTGCAGGTGGCGGTGGTGCTGCTGCCGCTGCTCCTCCAGCCGAGGAGAAGAAGGAAGAACCCCAAGAAGAGAGTGACGACGACATGGGCTTTAGCTTGTTCGATTAG 339 0.5044 MSLREIACAYAALILHEDRIAVTAENISTLLKTAKVKVESYWPTLFAKLAEMKNLEDLIASAGGGGAPVAVAAAPIAAAGGGGAAAAAPPAEEKKEEPQEESDDDMGFSLFD. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05625 112 CDD Ribosomal_P1 5 58 - -
Seca2g05625 112 FunFam 60S acidic ribosomal protein P1 1 63 - -
Seca2g05625 112 MobiDBLite consensus disorder prediction 81 112 - -
Seca2g05625 112 MobiDBLite consensus disorder prediction 97 112 - -
Seca2g05625 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Seca2g05625 112 Pfam 60s Acidic ribosomal protein 22 111 - -
Seca2g05625 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
Seca2g05625 112 Gene3D - 1 63 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05625 Seca-Chr2 142523526 142524279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05625 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 54.386 5.00e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05625 K02942 - gmx:100791962 122.094