Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05608 ATGTTGGGCAAAAGCTTTAGTTTCAAACAAGTTCAGCTGACATATCATCACCACCATGGAATACCAAAAGGGTTCATGGCAATCAAGGTGGGTCAAGGTGAAGAGCAACAGAGGATTACGGTACCCGTTAATTACCTCAACCACCCCCTGTTTATTCAGCTCCTCAAGGAGGCAGAGGAAGAGTATGGTTTTTCTCACCAGGGAACCATAATTATCCCTTGTCAAGTCACGGAGTTCAAGTATGTTCAGCACTTGATTGATTCTGAGATGTCCCACCACCACCACCATCTAGTTGCCTGCTTCAGGGCTTGA 312 0.4583 MLGKSFSFKQVQLTYHHHHGIPKGFMAIKVGQGEEQQRITVPVNYLNHPLFIQLLKEAEEEYGFSHQGTIIIPCQVTEFKYVQHLIDSEMSHHHHHLVACFRA. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05608 103 Pfam Auxin responsive protein 16 85 IPR003676 GO:0009733
Seca2g05608 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05608 Seca-Chr2 142379052 142379363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05608 21 88 Calmodulin-binding Proteins AT3G43120 48.529 2.63e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05608 K14488 - gmx:100500512 138.658