Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05605 ATGGCTTCAGATTCCAAAACGTTTACATTCGAGGAGGTGTCCAAACACAACAACAAAAAGGATTGCTGGATTATTATCCATGGAAAGGTTTATGATGTCACCCCGTTTTTGCATGATCATCCAGGAGGTGATGAATCTTTATTGTCATCAACAGGGAAGGATGCCACCGTTGATTTTGAAGATGTGGGCCACAGTGACTCTGCAATAGAAATGATGGAAAAATTCTTTGTTGGGAATGTTGACAGCTCCACCCTTCCAACTAAAGTTAACCACATTCCGCCACCACTCACACGTGGTGATAGCAATCAATCTTCAGGATTTGTTGCAAAGACTTTGCAATTCCTGTTGCCATTGTTGATATTGGCCTTTGCATTTGCTCTGCAGCACTATGGCAAAAAGAAACAGGTCAGCGACTCATGA 420 0.4238 MASDSKTFTFEEVSKHNNKKDCWIIIHGKVYDVTPFLHDHPGGDESLLSSTGKDATVDFEDVGHSDSAIEMMEKFFVGNVDSSTLPTKVNHIPPPLTRGDSNQSSGFVAKTLQFLLPLLILAFAFALQHYGKKKQVSDS. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05605 139 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Seca2g05605 139 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Seca2g05605 139 SMART Cyt_b5_2 8 81 IPR001199 -
Seca2g05605 139 FunFam Cytochrome b5 type B 2 85 - -
Seca2g05605 139 Gene3D - 2 84 IPR036400 -
Seca2g05605 139 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Seca2g05605 139 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Seca2g05605 139 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Seca2g05605 139 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Seca2g05605 139 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 91 IPR036400 -
Seca2g05605 139 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Seca2g05605 139 PANTHER CYTOCHROME B5 3 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05605 Seca-Chr2 142355180 142357866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05605 1 133 NADPH P450 reductases AT5G53560 59.398 9.71e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05605 K23490 - gmx:100788796 199.134