Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05599 ATGGATACTCTGTCAACCTCTGTTTCAACCCTCAAAATCCCACCAACAAATCGTGAACTCTATCACTTTACAAGATCTCCCTATGCAACCCCAACTCGTCCACCACAACCACAAACCCACGTCTCCTCCACTTCTATACCCAACTTGCTCCCCAAGACCAAGACTTTTTCATACAACAAGCGTTCTTCTTCTTCTTCTTCTCTATCATTCTCCTCCTCAAACACCACCTCCCCACCTCTCAAACTCAAACCATCTTCTTCAATATTCCATCAAAAGCCTGCTACTGGTTATGCAGCAGCTGTCATAGATGTGGCTCAAAACACCAATTCCCTTCACTTGGTTCAAAAGGATGCTAAGAGGCTCTTGAAATTCCTCCAAAATCTGAACTTTCAATCAACTGTGGGTGACCCTTCAATGGTTGAGGAGGTTAAAGGACAAGCCTTGAGAAAGGTGATAGAGCAGGGAAGTTTTCATAGGCATCTGGCTGTCATATTGAAGATGCTGGTGAAGAAGAACAAGGTGGCAATTGTGCAGGAAGTATTGGAAGAGTTCGAGAGGATTTATGATGATCTTTGTGGAACTCAAGTGGTATTGGTTTCGTCTACAACAAAGATGGGGGAAGAACAACTTTGTGGGATTGCTAAGGGCGTGCAGCAAGTAAGTGGGGCTTTCAGGGTGAAGGTAAAGAATTTGGTTCAAGAGAGCTTGCCTTCTTTCACCCTTCAAAGAGATTCTGTAAATGAAACTTTACAATTCAATCACAATCATCAAAGCTCCTACTTTATTTGA 789 0.4297 MDTLSTSVSTLKIPPTNRELYHFTRSPYATPTRPPQPQTHVSSTSIPNLLPKTKTFSYNKRSSSSSSLSFSSSNTTSPPLKLKPSSSIFHQKPATGYAAAVIDVAQNTNSLHLVQKDAKRLLKFLQNLNFQSTVGDPSMVEEVKGQALRKVIEQGSFHRHLAVILKMLVKKNKVAIVQEVLEEFERIYDDLCGTQVVLVSSTTKMGEEQLCGIAKGVQQVSGAFRVKVKNLVQESLPSFTLQRDSVNETLQFNHNHQSSYFI. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05599 262 Pfam ATP synthase delta (OSCP) subunit 95 236 IPR000711 GO:0015986|GO:0046933
Seca2g05599 262 Gene3D - 94 185 IPR026015 -
Seca2g05599 262 MobiDBLite consensus disorder prediction 35 85 - -
Seca2g05599 262 MobiDBLite consensus disorder prediction 26 85 - -
Seca2g05599 262 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 94 191 IPR026015 -
Seca2g05599 262 PANTHER ATP SYNTHASE DELTA CHAIN 69 237 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05599 Seca-Chr2 142296143 142296931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05599 94 242 Primary Pumps ATPases AT4G09650 34.641 2.33e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05599 K02113 - gmx:100526851 246.514