Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05513 ATGTCCAAGCAAAGGGCTTTCTTTTACAATAGTTTCACAATGAAGACCAGAAACTTGTTATTCTTTTCTTCACCACACATTTTTATCTTCTCAATCTGTTCTTTGTTAGCTTTGCTATGTTACTCTAAGCCATTAGAGAGGACTACCTACATAGTCCATATGGATAAATCTCACATGCCTGAATTTTTCACCTCCCAACACCATTGGTATTCATCCACCATTAGTTCCCTCAAAACAATACACTCCACCTCTTCAGATGAAAATGACAACCCCTCCATTATGTACTCTTATGACAATGCACTTCATGGGTTCAGTGTTGCCTTGTTACCAGAAGAGTTAGAGATTTTAAAGCAAACCCCAGGTTTCATCTCAGCATATAGTGACAGAGCAGCCATGCTTGACACCACCCAGACTTATGGATTCCTCTCTCTCAACCATTCCCATGGCCTTTGGCCTGCTTCCAATTATGGTGAAAATGTCATTGTTGGCATCATTGATTCTGGAATTTGGCCAGAGAGTGATAGCTTCAAAGACAATGGCATGATGAATGCTTCAAAAATTCCTTCACGGTGGAAGGGAACATGTGAGGGTGGACAAGAATTTGATCCTTCCCTATGTAACTCCAAACTCATAGGAGCAAGACACTTCAATAAGGGTGTTTTTGCTGCTCAAGGTAGTAACACTAAAATTGGCATGAACTCTGTTAGAGACACAATGGGACATGGAACTCACACTTCCTCTACAGTTGCTGGAAACTATGTAAAGGGTGCATCTTTTTTTGGTTATGCTAAAGGCACAGCCAGAGGAATTGCACCACGTGCAAGGATAGCTATGTACAAGGTTGCATGGCCTGAAGGAATATACGCCTCTGATGTTCTTGCAGGTATGGATCAAGCAATTGCTGATGGGGTTGATGTTATTTCTATCTCAATGGGGTTTGATAGGGTGCCTTTGTATGAGGACCCTGTAGCTATAGCTGCTTTTTCTGCTATGGAGAAAGGTGTGGTGGTTTCAACCTCAGCAGGAAACTCAGGTCCAGCATTAGGGTCCTTACACAATGGGATTCCGTGGGTTTTAACAGTTGGAGCAAGCAACACAGAGCGTTCTTTTGGAGGTACTTTAACTCTTGGAAACGGGAAGAGCTATGTGGGGTGGACATTGTTCCCAGCAAGTGCCACAGTAAATGAGCTTGCTCTAGTTTACCATAAGAACATTTCAGCATGTGATTCTCCTAAACTATTATCACAAGTAGCAGGTGGCAGCATTGTTATATGTGATCCTGTTATGGATGTTAAGGAGCAGATTGAACATGTGTCAGAGTCTGAAGTGTATGGAGCTATATTTATCTCCAGTGATCCTAGTCTCTTTGAAATGGGAAGAAGAATGACATGTCCTGGTGTTGTGATTAGTACTAAAGATGGAGAAGGTGTAATACAATATGCACAAAGGACAAGACACCCTTCAGCTACCATAAAGTTTCAACAAACCATTGTAGGAAAAAAACATGCTCCCACAGTGGCTACTTACAGTTCAAGAGGGCCTTCTTGGGGTTGTCCATCAATATTGAAGCCAGATGTGATGGCACCTGGATCATCAATTCTTGCAGCTTGGATTCCAGATTCACCTGTTGCACAAATTGGCTCAAATGTGTTTTTGAGTAATGAACACAGTTTGTTGACAGGGACTTCCATGGCTTGTCCTCATGCTTCTGGGGTTGTGGCTCTCTTGAAAAATGCACGCCCAGAATGGAGTGCTTCTGCTATTAGATCTGCACTCACAACCACAGCCAACTCATTGGATAATAATGGAAAGCCTGTTGAAGAGAATGGTGAGTTTCCTCAACCAGCTTCTCCTCTTGCAATGGGAGCTGGTCAAATTGATCCTAATCAAGCTCTTGATCCAGGTTTGGTTTATGATGCCACACCTCAAGATTATGTCAATCTCCTTTGTGCTATGAATTTTACCAAAAGCCAAATCTTAGCCATTACTAGATCAAGAGGCTATAATTGCTCAAACTCATCATCTTATGACCTCAATTACCCATCTTTCTTAGCTTTCTATGTCAATGAGAGTGTAGCAGTGGAGAGAAAATTCCGGAGAACTGTGACAAACGTTGGAGATGGTCCAGCTGTTTACACTGCCAGGGTGAGCTCTTCAAATGGCACCACAATCACCGTGTCTCCCAATAAGCTGGTTTTCAAGAGAAAATATGAGAAACGGAGCTTCACTTTGACATTGAAGTCTCAAATGGACAAGAAACGTGTTGTGGCTTATGGTGCACTCGAATGGGTTGAAGAAAGAGGAAGGCATCTTGTTAGGAGTCCCATTGTGGTGTCACCAATGAACGCTATCTTAAACTCCGAAATAGAAAGTGGGATTTAG 2382 0.4236 MSKQRAFFYNSFTMKTRNLLFFSSPHIFIFSICSLLALLCYSKPLERTTYIVHMDKSHMPEFFTSQHHWYSSTISSLKTIHSTSSDENDNPSIMYSYDNALHGFSVALLPEELEILKQTPGFISAYSDRAAMLDTTQTYGFLSLNHSHGLWPASNYGENVIVGIIDSGIWPESDSFKDNGMMNASKIPSRWKGTCEGGQEFDPSLCNSKLIGARHFNKGVFAAQGSNTKIGMNSVRDTMGHGTHTSSTVAGNYVKGASFFGYAKGTARGIAPRARIAMYKVAWPEGIYASDVLAGMDQAIADGVDVISISMGFDRVPLYEDPVAIAAFSAMEKGVVVSTSAGNSGPALGSLHNGIPWVLTVGASNTERSFGGTLTLGNGKSYVGWTLFPASATVNELALVYHKNISACDSPKLLSQVAGGSIVICDPVMDVKEQIEHVSESEVYGAIFISSDPSLFEMGRRMTCPGVVISTKDGEGVIQYAQRTRHPSATIKFQQTIVGKKHAPTVATYSSRGPSWGCPSILKPDVMAPGSSILAAWIPDSPVAQIGSNVFLSNEHSLLTGTSMACPHASGVVALLKNARPEWSASAIRSALTTTANSLDNNGKPVEENGEFPQPASPLAMGAGQIDPNQALDPGLVYDATPQDYVNLLCAMNFTKSQILAITRSRGYNCSNSSSYDLNYPSFLAFYVNESVAVERKFRRTVTNVGDGPAVYTARVSSSNGTTITVSPNKLVFKRKYEKRSFTLTLKSQMDKKRVVAYGALEWVEERGRHLVRSPIVVSPMNAILNSEIESGI. 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05513 793 CDD PA_subtilisin_like 373 491 - -
Seca2g05513 793 Gene3D Peptidase S8/S53 domain 159 645 IPR036852 GO:0004252|GO:0006508
Seca2g05513 793 ProSiteProfiles Serine proteases, subtilase domain profile. 138 632 - -
Seca2g05513 793 Pfam Fibronectin type-III domain 677 778 IPR041469 -
Seca2g05513 793 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 50 778 IPR045051 -
Seca2g05513 793 FunFam Subtilisin-like protease SBT1.5 159 375 - -
Seca2g05513 793 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Seca2g05513 793 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 40 133 IPR037045 -
Seca2g05513 793 Gene3D - 367 498 - -
Seca2g05513 793 Pfam Subtilase family 157 601 IPR000209 GO:0006508|GO:0008236
Seca2g05513 793 Gene3D - 649 781 - -
Seca2g05513 793 Pfam Peptidase inhibitor I9 49 129 IPR010259 -
Seca2g05513 793 PRINTS Subtilisin serine protease family (S8) signature 237 250 IPR015500 -
Seca2g05513 793 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Seca2g05513 793 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Seca2g05513 793 SUPERFAMILY Subtilisin-like 136 636 IPR036852 GO:0004252|GO:0006508
Seca2g05513 793 FunFam Subtilisin-like protease SBT1.9 39 134 - -
Seca2g05513 793 CDD Peptidases_S8_3 133 597 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05513 Seca-Chr2 141605654 141608035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05513 46 766 Subtilisin-like Serine Gene Family AT5G67090 42.469 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05513 - - ccaj:109796640 1133.63