Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05508 ATGCTTGGTTGGAGACAAAATCAGCTCACCAACATCCTTTTGACTGAGAATTACGAAGCCAAACTGTCAGATTTTGGACTGGCAAAGATGATGGGGATGGAAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACCATAGGGTACATGGATCCAGAGTACATGAGTAATGCCAAGCTAACATGTGCTAGTGATATATACAGTTTTGGCATTGTTGCTTTACAAATTCTGTCAGGACAGAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTAAGTATGGGAAAGCGTCCACTGTTGGATTTTGAAGACCCACGGCTAAATGGACAAGTTGATAAGGCTGACTTTGAAGCCATCTTACAGATTGCAGTGCTTTGTGTTGCCAAATCAAGCAAAGGTCGCCCAACCATTGAGGTTGTTTTTGATGAACTGGACAAGGTCTACAGGGATATGAAATCAAGGGAGCTTTGTTCTGTGCTTATAAAATTGACAATAGTTTTCTGTTTCTGCAGAAGGCAAAACAAGATTCGTGCTTATCGACAACATCCACCTCCAGCTCCAAGTCTCCAAAGACTCCTTCCTCCTCCTCTTTGA 615 0.4244 MLGWRQNQLTNILLTENYEAKLSDFGLAKMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLLDFEDPRLNGQVDKADFEAILQIAVLCVAKSSKGRPTIEVVFDELDKVYRDMKSRELCSVLIKLTIVFCFCRRQNKIRAYRQHPPPAPSLQRLLPPPL. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05508 204 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 154 - -
Seca2g05508 204 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05508 204 Pfam Protein kinase domain 10 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05508 204 SUPERFAMILY Protein kinase-like (PK-like) 10 174 IPR011009 -
Seca2g05508 204 Gene3D Transferase(Phosphotransferase) domain 1 5 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05508 Seca-Chr2 141575938 141577347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05508 10 162 Receptor kinase-like Gene Family AT1G16260 33.987 1.06e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Seca2g05508 Pkinase 7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05508 - - gsj:114407767 274.248