Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05507 ATGGGTCGGCACCTTTTATTTGCATTCTTCATTATTGCATTATTCATAGACTCCACCTCACTCGTATCCCCTGCACCCAATGGCCCTGCCCCTGAAGGTAACTGTGTGTTGAATTCCAACAACACATACCCATATGTGTCATTTGGTGAGTGTGGGGATGTGAAAGAGGACATTAGCAAGTGGGGTGGGGATGGTTTCCCTACCACTCTGTGCTGTCGTAATGCTCTGACTGTTCTGTCATACGCCCTGGCCTTGCAAGTCCGTAACTCAACGGGACAAGTCTTTGTTTCCCAAGATCAATGGCAGAGTTGTAGCCAGTTATTTCATCAGCAACAAGGGATGTCACCATCTTCATGTGGCTTTGACACCTTGTACTACGGGAGCTCCAAATGTTCTAACATCGTTTTGCAGGATGTTCGTGGCATACAGGAGTACCAAGATGCATTGAACAAATGTGAACACTTTGACCATCCATTTTATCAGTCATGTGCAGATTGTACCAGTGCAATATTGAGTGTGAGAGATAGTTTATATGATCAAATGGGAGACAACAATAATGCTACTGAGAGAGCCATATGTGGAGTAGCAACTCTTATTGCTGTTGCAGCTGACAAATCTGATGACCCTTCCCTCATTGACAAATTCTTGCGCTGCTTGCCAACTCCAGCAACAGGAAGAAACACGAGATCATTGGCAAAACTTGTGTTTAGTGTGCTGGTAGGTGTTCTTGCAGTATTGCTTCTTGTTTTTCTGGTGAAATGTGTGTCCAAGAAGAAGCCTCGTAAGCCAGCTCACTTGAAAGAGATCACTACCTGGTCTGGACTACGGTTCTCAAAATCTGAAATTGAGAAGGCATTGAATTATGGCAATGAAAAGATAAGCCTTGGACGTGGGAGTGCAGGCCAAGTGTACAAAGGTGTTCTCCCTAGTGGTCAAGTTGTGGCAATCAAGCATTTAACAAAGAGCAACAACTCTGATTCTTTCACTCGAGAAGTTGAAGGTCTTTCAAGGCTTCGTCACCCAAACCTGGTTTGTCTATTCGGCTGTTGCATGGAAGATGGTGAGAGATATTTAGTCTATGAATATTGTGCAAATGGAAATCTAGCTCAACATCTCTTGAGTAATGTTCTCTGCCCTTCACACTTTACTCTTTAA 1155 0.4381 MGRHLLFAFFIIALFIDSTSLVSPAPNGPAPEGNCVLNSNNTYPYVSFGECGDVKEDISKWGGDGFPTTLCCRNALTVLSYALALQVRNSTGQVFVSQDQWQSCSQLFHQQQGMSPSSCGFDTLYYGSSKCSNIVLQDVRGIQEYQDALNKCEHFDHPFYQSCADCTSAILSVRDSLYDQMGDNNNATERAICGVATLIAVAADKSDDPSLIDKFLRCLPTPATGRNTRSLAKLVFSVLVGVLAVLLLVFLVKCVSKKKPRKPAHLKEITTWSGLRFSKSEIEKALNYGNEKISLGRGSAGQVYKGVLPSGQVVAIKHLTKSNNSDSFTREVEGLSRLRHPNLVCLFGCCMEDGERYLVYEYCANGNLAQHLLSNVLCPSHFTL. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05507 384 ProSiteProfiles Protein kinase domain profile. 289 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05507 384 Gene3D Phosphorylase Kinase; domain 1 251 362 - -
Seca2g05507 384 Pfam Protein kinase domain 294 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05507 384 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 82 373 - -
Seca2g05507 384 SUPERFAMILY Protein kinase-like (PK-like) 267 377 IPR011009 -
Seca2g05507 384 Pfam SPARK 31 188 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05507 Seca-Chr2 141574066 141575870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05507 163 373 Receptor kinase-like Gene Family AT1G11050 32.314 2.45e-20 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Seca2g05507 SPARK 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05507 - - gmx:100807158 464.151