Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05447 ATGCATACCCGTGCATGTCTCTTGCTTTCTCTTGTGGGTATCCTTGTCTTGTTGAATGGCATTCATGGTGCATGGACAGAGGAGCCAGGATCATTGATCCTGGGTTGTGGGTTGGGTGAAGGAGGTGCCAAAGATGTTGATGGAAGGCAATGGAGCCCTGATGATAAGTTCCTTGAAGCACAAGGTAATGCAATCACATCCAAAGCCTCTTACCAAGACCCTTCTGTTTTGTCTGAGGTTCCATACATGTCAGCTAGAGTTTTCACATCAGAGGCAACATACAAATTCCCTGTTCTACCTGAGAAACGCTATTGGCTCAGGCTCCATTTTTATCCATCTCTTTATGGCAGTCTCAACCCTTCTGATTCATATTTCTCCGTGACTGCAAATGGGGTTACGCTTCTCAGCAATTTCAGCGCCTCAATCACTTGTGAGGCCCTCTCACAAGCTTACATTGACAGAGAGTATTCCCTTGCACCTTTGAATACAGATAGTTTGACCCTTACCTTCAAGCCATCTGACAAGTACAAAGGGGCTTTTGCTTTCATCAATGGCATTCAGTTGATCCCAATGCCAGAGTTATTTGATTCTGGTGCATTGGTTGGGTATGCTGACCAAACCGTGGATGTCAAAAGCTTGAATTTGCAAACCATGTTCAGACTAAACGTTGGTGGACAATATATATCTCCCACACAAGATTCTGGCCTTACAAGGATGTGGTATGATGACACACCTTACTTGTATGGTGCAGCCACTGGTGTCACCAACCAAGCTGAAAAGGATGTCCAAATCAACTATCAGACCATGCCACGGTACGTTGCTCCTGCTGATGTCTACTCCACATCAAGATCAATGGGAAATGACAAGGATGTCAACATGGGCTTCAATCTCACTTGGATTTTCCAAATTGATCCAAATTCCATGTACCTTACGAGGTTGCATTTCTGTGATTACTATTATTCCAAAGTCAATGAGATTGTTTTCAATATCTATGTCAACAACCAAACGGCAGAAGCTCAAGCTGATGTGATTGGATGGACAGGAGGTAAAGGGGTGCCAACTTACAAGGACTATGTGGTATATGTCCAAGATGTGGAGGGGGATGAGCAGCTTTGGCTTGCTCTACACCCAGCACCTGATACAATGCCAGAGTTCTATGATGCCATACTCAATGGGGTGGAGATATTCAAGATCAATGACACAAACTTGTCTGGTCCCAATCCTCAACCTTCAGACATGTTCCTCAGGCATCAAGGGGATGGAATGGGTTTCCAAAACCCCAGAGCATATGATAAGAATGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTTTTGCCTTAATGGCTGCAATATGTGTTGCTGTCTACCACAAGAAGAAGAGAGCTCCGGGGTCAGACACCCACACAAGCTGGCTGCCCATCTACTTGAACTCACACACAAATGGCAGCAAATCCACCTCATCTGGGAAGAGCATTGCTAGTGGCAACCTCTCTGTTATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTACAAGAGATAAAGCATGCAACCAAGAATTTTGATGAGTCCAACGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGTCATTGATAATGGAATGAAGGTGGCAATTAAGAGGTCTAATCCACAATCAGAACAAGGAGTTAATGAATTCCAGACTGAAATTGAGATGCTTTCCAAACTGAGACACAAGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAAGATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGAACCTTTAGGGAACATTTGTATAAAGGCAACAAGCCTTTGTCTACTCTATCATGGAAGCAAAGGTTGGAGATCTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGAGCTAAGTACACCATCATTCATAGAGATGTTAAAACAACTAACATTCTCTTGGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGGTTGTCAAAAACGGGTCCAAATATGAACAATGGACATGTTAGTACTGTGGTGAAGGGTAGTTTTGGCTACTTGGATCCTGAATATTTCAGGAGGCAACAGTTGACTGAAAAGTCTGATGTCTACTCATTTGGGGTTGTGCTATTTGAAGCCCTCTGCGCTAGGCCTGTTTTGAATCCTAATCTTCCAAAGGAACAGGTTAGTCTTGCTGATTGGGCATTGATCTGCAAACAAAAAGGAACGCTAGAGGATATTATAGACCCACATATCAAGGGAAAGATTAATCCAGAAAGCTTGAAAAAGTTTGTAGACACAGCTGAAAAGTGTTTGTCTGACAGTGGACTTGACCGTCCCTCCATGAATGATTTGTTGTGGAATCTAGAATTTGCTCTCAACCTGCAAGAGAACGTTGATGGTTCAACTCACTCTTCTCGTGTTGAGGAAAGTGAGTTTGAAGAAATAAGCTTGAGAGACAAGGACATTGCTGCCCATTATAAGAACCTGAGCCTTGGAAGTGAGCATGAGCTTAGCCAGGATTCAAGTGAGAATCCCACTGCCATCTTCTCACAACTTGTCAATCCTACAGGGCGATGA 2592 0.4394 MHTRACLLLSLVGILVLLNGIHGAWTEEPGSLILGCGLGEGGAKDVDGRQWSPDDKFLEAQGNAITSKASYQDPSVLSEVPYMSARVFTSEATYKFPVLPEKRYWLRLHFYPSLYGSLNPSDSYFSVTANGVTLLSNFSASITCEALSQAYIDREYSLAPLNTDSLTLTFKPSDKYKGAFAFINGIQLIPMPELFDSGALVGYADQTVDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAATGVTNQAEKDVQINYQTMPRYVAPADVYSTSRSMGNDKDVNMGFNLTWIFQIDPNSMYLTRLHFCDYYYSKVNEIVFNIYVNNQTAEAQADVIGWTGGKGVPTYKDYVVYVQDVEGDEQLWLALHPAPDTMPEFYDAILNGVEIFKINDTNLSGPNPQPSDMFLRHQGDGMGFQNPRAYDKNAVIGGAAGGAAGFALMAAICVAVYHKKKRAPGSDTHTSWLPIYLNSHTNGSKSTSSGKSIASGNLSVMAQGLCRYFSLQEIKHATKNFDESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTFREHLYKGNKPLSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPNLPKEQVSLADWALICKQKGTLEDIIDPHIKGKINPESLKKFVDTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENVDGSTHSSRVEESEFEEISLRDKDIAAHYKNLSLGSEHELSQDSSENPTAIFSQLVNPTGR. 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05447 863 FunFam Receptor-like protein kinase FERONIA 597 812 - -
Seca2g05447 863 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05447 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Seca2g05447 863 FunFam FERONIA receptor-like kinase 213 399 - -
Seca2g05447 863 Pfam Malectin-like domain 35 398 IPR024788 -
Seca2g05447 863 Pfam Protein tyrosine and serine/threonine kinase 525 789 IPR001245 GO:0004672|GO:0006468
Seca2g05447 863 Gene3D Phosphorylase Kinase; domain 1 481 596 - -
Seca2g05447 863 FunFam FERONIA receptor-like kinase 31 192 - -
Seca2g05447 863 FunFam receptor-like protein kinase FERONIA 483 596 - -
Seca2g05447 863 SUPERFAMILY Protein kinase-like (PK-like) 497 796 IPR011009 -
Seca2g05447 863 CDD STKc_IRAK 527 794 - -
Seca2g05447 863 Gene3D - 213 399 - -
Seca2g05447 863 Gene3D - 34 191 - -
Seca2g05447 863 Gene3D Transferase(Phosphotransferase) domain 1 597 816 - -
Seca2g05447 863 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g05447 863 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Seca2g05447 863 PANTHER OS07G0166700 PROTEIN 505 800 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05447 Seca-Chr2 140947829 140950420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05447 32 863 Receptor kinase-like Gene Family AT3G51550 54.200 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca2g05447 Malectin_like 4.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05447 - - gmx:102659961 1461.43