Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05435 ATGGAGCTACCTTCGAATCTGTTGGCAGACGAGGCGAGCCCTGAGTGGATGAACAAAGGGGACAACGCATGGCAGCTAACGGCAGCCACATTGGTGGGCCTCCAAAGCATTCCTGGGCTTGTCATCCTCTATGGAAGCCTTGTTAAAAAGACATGGGCCATTAACTCTGCTTTCATGGCCTTCTATGCCTTCGCTGCCGTTCTCCTTTGCTGGGTTTCGTGGGCTTTCCGCATGTCATTCGGCGATAAATTGGTTTTCTTCTTAGGGAAACCCGGCGTCGCATTGGATGAGAAATTCCTTTTAGGGCAGGCCTTTTTGGGGCTCTTTCCTACCGCTACCATGGTCTTTTTTCAAGGTGTGTTTGCAGGGATCACTTTGATTTTAATAGCAGGTGCGTTATTGGGGAGAATGAATATTCGAGCGTGGATGCTGTTTGTGCCACTTTGGGTTACTTTCTCATACAGTGTCACTGCCTTCAGCATTTGGTGCCCTGATGGATGGTTGGCAAAGCTTGGAGTTATTGATTTTGCTGGGGGTTATGTTATTCACCTCTCTGCAGGAGTTGCTGGTGTCACTGCAGCTTATTGGGTAGGTCCACGATCAGAGAAAGAGAGAGAAAATTTTGCATCAAACAACATGATGGTGGTGCTTGCAGGCGCAGGCCTGCTTTGGATGGGTTGGAGTGGATTCAACGGTGCAGCTCCATTCGTAGCCAGCACAGTGGCATCTCTTGCTGTCCTGAACACACACGTGTGTACTTCCGCAAGCGTTGTCGTTTGGGTCCTACTCGATACTTTCTGCTTCGGCAAACCTACAGTGTTTGGTGCCGTACAAGGCATGATCACTGGTCTCGTTTGCATCACACCTGCCGCAGGAGTTGTGCAGGGGTGGGCAGCGATTTTGATGGGTTTGATATCAGGAAGTGTTCCATGGTACACAATGATGGTGCTCCACAACAAGGTTCCTTTCTTAAAGCAAATAGATGACCCCATGGCGGTGTTTCACACGCACGCCATCGCGGGTGCTCTTGGCGGCATTCTCACTGGCTTCTTTGCTGTGCCTAAACTGTGCCGTCTCTTCTACATGGTTCCCGATTGGGAAAAATACATTGGCCTCTTCTATGGCCTCCAGAATGGTGCCACTCATGCGGGTTTAAGACAGATGGCAATCCAAGTTGGAGCCATTGCTTTTGTCATTTGCTTCAATTTCGTTACGACGAGCTTGATTTGCTTGCTTGTGGGTCTCATAGTACCACTTAGGCTTAATACCGATGCATTGCATATGGGTGACAAGGCAATACATGGAGAGGAGGCTTTCGCCTTGCATGGTGAGGCTACAAAATTTGAGAACCTGAAGCACAATAAGATTTATGATACTCAAGATTTTTCATTCGTTAAGGAGTCAAGGTCATTAGGTCAGCTTCAAATGGTATGA 1434 0.484 MELPSNLLADEASPEWMNKGDNAWQLTAATLVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAAVLLCWVSWAFRMSFGDKLVFFLGKPGVALDEKFLLGQAFLGLFPTATMVFFQGVFAGITLILIAGALLGRMNIRAWMLFVPLWVTFSYSVTAFSIWCPDGWLAKLGVIDFAGGYVIHLSAGVAGVTAAYWVGPRSEKERENFASNNMMVVLAGAGLLWMGWSGFNGAAPFVASTVASLAVLNTHVCTSASVVVWVLLDTFCFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGLISGSVPWYTMMVLHNKVPFLKQIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLFYGLQNGATHAGLRQMAIQVGAIAFVICFNFVTTSLICLLVGLIVPLRLNTDALHMGDKAIHGEEAFALHGEATKFENLKHNKIYDTQDFSFVKESRSLGQLQMV. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05435 477 Pfam Ammonium Transporter Family 23 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Seca2g05435 477 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Seca2g05435 477 PRINTS Rhesus blood group protein signature 245 267 IPR002229 GO:0005886
Seca2g05435 477 PRINTS Rhesus blood group protein signature 214 232 IPR002229 GO:0005886
Seca2g05435 477 PRINTS Rhesus blood group protein signature 300 318 IPR002229 GO:0005886
Seca2g05435 477 FunFam Ammonium transporter 5 442 - -
Seca2g05435 477 Gene3D Ammonium transporter AmtB like domains 5 457 IPR029020 -
Seca2g05435 477 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Seca2g05435 477 PANTHER AMMONIUM TRANSPORTER MEP2 5 450 IPR001905 GO:0008519|GO:0016020|GO:0072488
Seca2g05435 477 SUPERFAMILY Ammonium transporter 16 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05435 Seca-Chr2 140830957 140833313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05435 112 471 Inorganic Solute Cotransporters AT2G38290 51.099 1.41e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05435 K03320 - gmx:100782944 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05435 2 140830957 140833313 Seca2g05435 2 140830957 140833313 ECH