Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05432 ATGTCAAAGAGAAAGGTTAGAGAGCCCAAGGAGGAAAATGTCACCCTTGGTCCTGCTGTAAGAGACGGTGAGCATGTTTTTGGTGTCGCTCGCATTTTTGCATCTTTTAATGACACCTTCATTCATGTGACTGATTTGTCTGGAAGGGAAACACTTGTCCGCATTACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAGTCATCTCCATATGCTGCTATGCTTGCAGCACAAGATGTTGCTGCTAGATGCAAGGAGTTGGGCATAACTGCTCTTCATATCAAGCTCCGTGCAACAGGAGGAAACAAGACAAAAACACCTGGCCCTGGTGCTCAGTCTGCTCTCCGTGCCTTGGCTCGGTCTGGAATGAAAATTGGTCGCATAGAGGATGTGACCCCAATTCCTTCAGATAGCACACGTAGAAAGAGTGGTAGAAGGGGTAGAAGGCTTTGA 453 0.4702 MSKRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05432 150 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Seca2g05432 150 MobiDBLite consensus disorder prediction 130 150 - -
Seca2g05432 150 FunFam 40S ribosomal protein S14 1 150 - -
Seca2g05432 150 Hamap 30S ribosomal protein S11 [rpsK]. 3 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Seca2g05432 150 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 3 143 IPR001971 GO:0003735|GO:0005840|GO:0006412
Seca2g05432 150 ProSitePatterns Ribosomal protein S11 signature. 115 137 IPR018102 -
Seca2g05432 150 Gene3D Ribosomal protein S11 1 150 IPR036967 GO:0003735|GO:0005840|GO:0006412
Seca2g05432 150 Pfam Ribosomal protein S11 28 146 IPR001971 GO:0003735|GO:0005840|GO:0006412
Seca2g05432 150 SUPERFAMILY Translational machinery components 23 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05432 Seca-Chr2 140814657 140816569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05432 1 139 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 91.367 4.47e-93 264