Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05428 ATGTCGAGTTCAAGGGTAACCCTGCACTCAAAACTAACGGCCGTTTCCAGCAAACCCGTTAGGTCGGGTAAGACCCATACCCTCTCGGCGTTGGACCATGCCATGGGTTTTCACACCCTTCACATAATATTCTACTACAAGAATGAGGGCAACAATTTGTTTGAGTCCTTTGATTTGGACCCGTTGAGGGAATCATTGTCTGAGGTTCTTACAATGTACCCGACCATGACGGGTCGGTTAGCCCGAGGGGTGGATGGTAACTGGGAAGTAAGGTGCAATGATGCGGGTGTTCGGGTCATAATGGCAAACGTGGATACCACACTCAATGAGTGGCTCTCATCTGCTTCTGGATCCGAAGAGGAACATCTAATTGCTTGGGATGATATGCCTCATGATCCTCACACATGGTCACCCTTTCGAATTCAGATAAACAGCTTCAAAGAAGGAGGTGTTGCAATAGGACTAAGTTGTAGCCACATGCTTGCTGATCTAACTTGTGCTGCATTATTCTTCAAATCATGGACTGAAACTCACCGCCACTTACCTATTACCCACCCTCCTTTCTTCACTCCAATTCGTGCTTCACCACTTCCAAACTCGGATACAGAGTCTCTCCCTCTCAATGCAACAAAAGCACAAATAATGGCCTCTTCAAGAAACATGGCCACAGCCACTTTCAAATTTTCCAGTTCAATTATGAAGCAATGTCTCTCCAAAGTCCATGACACATGCCCCAATGCCACCCCTTTTGATTTCCTCTCTGCTCTGTTTTGGACTCGCATTGCTCGCTTGAAGTCCCCAAAAAATCAGGACCAAACCCACTCTCTATCAATCTGCACTGACTTCAGGAGACTCATGAAACCACCCCTCCCAATTGGGTATTTCGGCAATGCGTTACATTTTTCAATGATTTCAGTAAAAGTGGAAGACATAGAGAGTGAGCAATTAGGAGGCATAGCTAGTAAAGTGCATAACCACTTGGCAGGGCTAGCAGAGGAAGAAATAAGGTCTGCTATGGAATGGTTAGGGTCAGAAAAGGAAAGAGAGGGAGGGAAATTCAGATATGGGAGTGAGTTAACTTGTGTTTGCATGGAGCACATGATGATTTCTTCTGAACAGTCGTTGCTATATGAAGCAATGTTTAGCAGTAATGAGAAGCCAGAACATGTGTCATGTCATGTGGGGAATGTGGATGGTGAAGGATTGATTATGGTGATGCCTTCCTCAGAAGGAGGACTTGCAAGAACGGTGATGGTGACGCTGCCACGGGAAGAATTAGCTAAAGTAAGCAAGGATCAAGCAATATTGCAGTTGGAGCCAATAATGATCCTTGCTGGTTGTGGGGTTGAGGAAAATCATTGA 1362 0.4545 MSSSRVTLHSKLTAVSSKPVRSGKTHTLSALDHAMGFHTLHIIFYYKNEGNNLFESFDLDPLRESLSEVLTMYPTMTGRLARGVDGNWEVRCNDAGVRVIMANVDTTLNEWLSSASGSEEEHLIAWDDMPHDPHTWSPFRIQINSFKEGGVAIGLSCSHMLADLTCAALFFKSWTETHRHLPITHPPFFTPIRASPLPNSDTESLPLNATKAQIMASSRNMATATFKFSSSIMKQCLSKVHDTCPNATPFDFLSALFWTRIARLKSPKNQDQTHSLSICTDFRRLMKPPLPIGYFGNALHFSMISVKVEDIESEQLGGIASKVHNHLAGLAEEEIRSAMEWLGSEKEREGGKFRYGSELTCVCMEHMMISSEQSLLYEAMFSSNEKPEHVSCHVGNVDGEGLIMVMPSSEGGLARTVMVTLPREELAKVSKDQAILQLEPIMILAGCGVEENH. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05428 453 SUPERFAMILY CoA-dependent acyltransferases 27 191 - -
Seca2g05428 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 423 - -
Seca2g05428 453 Gene3D - 204 431 IPR023213 -
Seca2g05428 453 Gene3D - 1 203 IPR023213 -
Seca2g05428 453 Pfam Transferase family 5 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05428 Seca-Chr2 140769809 140772780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05428 37 431 Monolignol Biosynthesis Gene Families AT5G48930 25.917 1.89e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05428 - - lja:Lj1g3v4958860.1 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05428 2 140769809 140772780 Seca2g05428 2 140769809 140772780 ECH