Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05416 ATGGGCAAGAATCTGATAAGAAAAAGGCATCCCAGTGCAACATTTCAGATCATTGATGTTCTTCATCCAGGTAGGGCAATTGTTTCCATGGCTGAGTTAAAGGAGAAACTGGCAAGAATGTATGAAGTGAAGGACCCAAACACTCTATTTGTTTTCAAATTCCGAACTCACTTTGGAGGTGGTTTTGGTTTGATTTATGATTCGGTTGAGAATGCAAAGAAGTATGAGCCCAAGTACATGCATATCAGGAATGGACTTGATACTAAGGTTGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAAAAGGGCTAA 312 0.3942 MGKNLIRKRHPSATFQIIDVLHPGRAIVSMAELKEKLARMYEVKDPNTLFVFKFRTHFGGGFGLIYDSVENAKKYEPKYMHIRNGLDTKVEKSRKQMKERKKG. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05416 103 Pfam Ribosomal protein S24e 18 91 IPR001976 GO:0003735|GO:0005840|GO:0006412
Seca2g05416 103 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 17 96 IPR012678 GO:0003735|GO:0005840|GO:0006412
Seca2g05416 103 PANTHER 40S RIBOSOMAL PROTEIN S24 17 102 IPR001976 GO:0003735|GO:0005840|GO:0006412
Seca2g05416 103 Gene3D - 14 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05416 Seca-Chr2 140685631 140688433 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05416 17 101 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 80.899 9.05e-49 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05416 K02974 - thj:104818646 154.836