Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05395 ATGGCTCTATCACCTCCCTCTCTAACATTTAAAGTGTGGAGGTGCCAACCGGAGCTGGTGGCTCCTGCTACACCCACTCCTCGCGAAGTTAAACTATTATCTGACATTGATGATCAAGAAGGACTGCGTTTCCAAATCCCAATCGCACAAGTGTATCGTCATGAACCATCCATGACAGGAAAAGACCCTGTTCAAGTCCTTAAAAAGGCACTGGCACAAACACTTGTTTTCTATTACCCCTTTGCGGGCAGACTTAAGGAGGGACCAAACCGCAAATTGATGGTGGATTGTACTGGGGAGGGCGTCATGTTCATTGAAGCTGATGCAGATGTAACACTCCATCAATTCGGTGGTGATGCTCTTCAACCTCCATTCCCATGCTTCCAAGAACTCTTATATGACGTTCCAGGCTCAGAACATGTTATCAACTGTCCCCTTCTACTCATACAGGTCACACGTCTTAAGTGTGGTGGTTTTATGGTGGCCACCCGCTTAAACCACACCATGAGCGACGGAGCAGGTATTAAACAGTTCATGAACACCTGGGCCGAAATGGCTCGAGGTGCAAGCCAACCTTCTATTTTACCTGTGTGGCATAGGGAGCTTCTAATGGCAAGAGATCCACCGAGCATTACATGCAACCATCATGAATACGAGCAAGTGACCGATAACACCCTCGAGGAAGGGACCATTATGGATGATCGATCTTTCTTCTTTGGACCCACTGAGATAGCCGCCCTTCGTCGCTTGCTTCCCTTTCACCTTCGCGAATGCAGTACCACATTTGATATTATCACTGCATGTTTGTGGTGTTGTCGCACCAAAGCGTTGCAGCTAAAGCCAGAAGAAGAGGTTCGCATGATGTGCATCATCAATTCACGTTCCAGGTTTAACCCTCCTTTACCTGTTGGTTATTATGGCAACGGTTTTGTGTTCCCTGCGGCGGTTACAACTGTTGGAAAACTTTGTGGAAACCCATTTGGCTATGCTGTGGATTTATTAAGGAAAGTAAAAAATGAGGTCACCGAGGAGTATGTGCATTCTGTGGCAGATTTTATGGTGTTGAAAGGACGATGTTTGTTTACAACAGTGAGGTCTTGCATTGTGTCTGATTTGACACGTGCTAGATTCAGAGAAGTGGACTTTGGGTGGGGCAAGGCAGTATATGGTGGTGTGGCCAAAGGTGGGGCCGGACCCTTCCCTGGAGCAACCTTTCTCACACCGTCTAAGAATGCAATAGGAGAAGAAGGTATTTTATTGCCAATTTGCTTGCCTGCCGAAACTATGAAGAGGTTTGCTAAAGAATTGAATGACATGATAGGGAACCATAACCAGCCTACGGTGAGTGGTACTAGGGCGCGGGTGCTCGAGTCGAGTACTCTGGGTTCCAAGACCCAGTCACGAAAGGTTATGTGTGGTAAAATGTTAATTTCATCTAGAATCTAG 1446 0.4675 MALSPPSLTFKVWRCQPELVAPATPTPREVKLLSDIDDQEGLRFQIPIAQVYRHEPSMTGKDPVQVLKKALAQTLVFYYPFAGRLKEGPNRKLMVDCTGEGVMFIEADADVTLHQFGGDALQPPFPCFQELLYDVPGSEHVINCPLLLIQVTRLKCGGFMVATRLNHTMSDGAGIKQFMNTWAEMARGASQPSILPVWHRELLMARDPPSITCNHHEYEQVTDNTLEEGTIMDDRSFFFGPTEIAALRRLLPFHLRECSTTFDIITACLWCCRTKALQLKPEEEVRMMCIINSRSRFNPPLPVGYYGNGFVFPAAVTTVGKLCGNPFGYAVDLLRKVKNEVTEEYVHSVADFMVLKGRCLFTTVRSCIVSDLTRARFREVDFGWGKAVYGGVAKGGAGPFPGATFLTPSKNAIGEEGILLPICLPAETMKRFAKELNDMIGNHNQPTVSGTRARVLESSTLGSKTQSRKVMCGKMLISSRI. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05395 481 Gene3D - 216 436 IPR023213 -
Seca2g05395 481 Pfam Transferase family 15 438 - -
Seca2g05395 481 Gene3D - 10 215 IPR023213 -
Seca2g05395 481 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05395 Seca-Chr2 140529504 140531693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05395 19 436 Monolignol Biosynthesis Gene Families AT5G48930 30.485 2.28e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05395 K19861 - gmx:100792864 676.396