Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05392 ATGGCACCCGTGGTGGATCTGTCTAGGATTAGTCTTCGGCCATTCAAGCTAAGCGATGTTGACGATTTCTTGTTATGGGCAGGGGATGATCAAGTCACTAGAAATATCCGATGGAAGACATGTGGTTCGAGGGAAGAGGCTTTGGATTTCATTAGGGATGTTTGCATACCTCACCCTTGGCGCCAGTCAATCTGTCTTGATGACCGTTCCATCGGTTTTGTTTCGGCTGACATAGGCTATGCTATATCAGCGGCCTACTGGGGTCAAGGGATAACCACTAAAGCACTCAAGATTGCTGTGTCTCAAGTCTTTAAGGACTTCCCCTATTTGCTAAGGTTACAGGCTTTTGCTGACGTGGAGAACAAGGCTTCACAGAGGGTATTGGAAAAGGCTGGATTCCTTAAAGAAGTCAACTTGTCAAGAATCACCCTGAGGCCGTTTAAGTTGACTGACGTAGATAATTTCATGTTGATGGCAGGTGATGATAAAGTGACATGCCATACCAGATGGAACACTTTTTTTTCCAGGGACCAAGCTTTGACTTTCATTCGAGATGTGTGCATGCCTCATCCATGGAATCGATCCATATGCATTGATGATCAAACTATTGGATTGTGTAGGGCAGAGATAGGCTATGCTATAGCTGCCAAGTATTGGGGCCAAGGGATATGCACCAAAGCAGTGAAGATGGCTGTGTCACAAGTCTTCAAGGACTTCCCTGATTTGATAAGGATACAAGCTTTTGTTGCTGCAGAGAACAAAGCTTCCCAGAGGGTCTTGGAAAAGGTAGGATTTCTTAGAGAGGGCATACTGAGAAAGTATTCTTATGTCAAGGGGATTGGGCAATCCAACTTGAGGCCGTTTAAGTTGACCGATGTAGATGATTTCATGTTAATGGCAGGTGATGATAAAGTGACCTGCCATACCCGATGGAACACTTTTGTTTCCAGGGACCAAGCTTCGACTTTCATTCGAGATGTGTGCATGCCTCACCCATGGAATCGATCCATATGCATTGATGATCAAACTATTGGATTTATATCCGTGTCTCCTGGATCAGGTAATGAGAGGTGTAGGGCAGAGATAAGCTATGCTATAGCTGCCAAGTATTGGGGCCAAGGGATATGCACCAAAGCAGTGAAGATGGCTGTGTCACAAGTCTTCAAGGACTTCCCTGATTTGATAAGGACACAAGCTTTAGTTTTTGCAGAGAACAAAGCTTCCCAGAGGGTCTTGGAAAAGGCAGGATTCCTTAGAGAGGGCATACTGAGAAAGTATTCTTATGTCAAGGGCATTGTTAAGGATGTGGCTATTTTTAGCCTTTTGTCAGAGGATACTCATTCTCCAGAGTAA 1353 0.4464 MAPVVDLSRISLRPFKLSDVDDFLLWAGDDQVTRNIRWKTCGSREEALDFIRDVCIPHPWRQSICLDDRSIGFVSADIGYAISAAYWGQGITTKALKIAVSQVFKDFPYLLRLQAFADVENKASQRVLEKAGFLKEVNLSRITLRPFKLTDVDNFMLMAGDDKVTCHTRWNTFFSRDQALTFIRDVCMPHPWNRSICIDDQTIGLCRAEIGYAIAAKYWGQGICTKAVKMAVSQVFKDFPDLIRIQAFVAAENKASQRVLEKVGFLREGILRKYSYVKGIGQSNLRPFKLTDVDDFMLMAGDDKVTCHTRWNTFVSRDQASTFIRDVCMPHPWNRSICIDDQTIGFISVSPGSGNERCRAEISYAIAAKYWGQGICTKAVKMAVSQVFKDFPDLIRTQALVFAENKASQRVLEKAGFLREGILRKYSYVKGIVKDVAIFSLLSEDTHSPE. 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05392 450 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 142 292 IPR000182 GO:0016747
Seca2g05392 450 Gene3D - 3 138 - -
Seca2g05392 450 Gene3D - 283 445 - -
Seca2g05392 450 Pfam Acetyltransferase (GNAT) domain 9 133 IPR000182 GO:0016747
Seca2g05392 450 Pfam Acetyltransferase (GNAT) domain 141 265 IPR000182 GO:0016747
Seca2g05392 450 Pfam Acetyltransferase (GNAT) domain 285 417 IPR000182 GO:0016747
Seca2g05392 450 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 284 446 - -
Seca2g05392 450 Gene3D - 139 282 - -
Seca2g05392 450 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 140 279 IPR016181 -
Seca2g05392 450 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 136 IPR016181 -
Seca2g05392 450 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 151 IPR000182 GO:0016747
Seca2g05392 450 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 283 435 IPR000182 GO:0016747
Seca2g05392 450 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 285 442 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05392 Seca-Chr2 140488623 140502235 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca2g05392 Acetyltransf_3 1.3e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05392 - - spen:107011978 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05392 2 140488623 140502235 Seca2g05392 2 140488623 140502235 ECH