Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g05392 | ATGGCACCCGTGGTGGATCTGTCTAGGATTAGTCTTCGGCCATTCAAGCTAAGCGATGTTGACGATTTCTTGTTATGGGCAGGGGATGATCAAGTCACTAGAAATATCCGATGGAAGACATGTGGTTCGAGGGAAGAGGCTTTGGATTTCATTAGGGATGTTTGCATACCTCACCCTTGGCGCCAGTCAATCTGTCTTGATGACCGTTCCATCGGTTTTGTTTCGGCTGACATAGGCTATGCTATATCAGCGGCCTACTGGGGTCAAGGGATAACCACTAAAGCACTCAAGATTGCTGTGTCTCAAGTCTTTAAGGACTTCCCCTATTTGCTAAGGTTACAGGCTTTTGCTGACGTGGAGAACAAGGCTTCACAGAGGGTATTGGAAAAGGCTGGATTCCTTAAAGAAGTCAACTTGTCAAGAATCACCCTGAGGCCGTTTAAGTTGACTGACGTAGATAATTTCATGTTGATGGCAGGTGATGATAAAGTGACATGCCATACCAGATGGAACACTTTTTTTTCCAGGGACCAAGCTTTGACTTTCATTCGAGATGTGTGCATGCCTCATCCATGGAATCGATCCATATGCATTGATGATCAAACTATTGGATTGTGTAGGGCAGAGATAGGCTATGCTATAGCTGCCAAGTATTGGGGCCAAGGGATATGCACCAAAGCAGTGAAGATGGCTGTGTCACAAGTCTTCAAGGACTTCCCTGATTTGATAAGGATACAAGCTTTTGTTGCTGCAGAGAACAAAGCTTCCCAGAGGGTCTTGGAAAAGGTAGGATTTCTTAGAGAGGGCATACTGAGAAAGTATTCTTATGTCAAGGGGATTGGGCAATCCAACTTGAGGCCGTTTAAGTTGACCGATGTAGATGATTTCATGTTAATGGCAGGTGATGATAAAGTGACCTGCCATACCCGATGGAACACTTTTGTTTCCAGGGACCAAGCTTCGACTTTCATTCGAGATGTGTGCATGCCTCACCCATGGAATCGATCCATATGCATTGATGATCAAACTATTGGATTTATATCCGTGTCTCCTGGATCAGGTAATGAGAGGTGTAGGGCAGAGATAAGCTATGCTATAGCTGCCAAGTATTGGGGCCAAGGGATATGCACCAAAGCAGTGAAGATGGCTGTGTCACAAGTCTTCAAGGACTTCCCTGATTTGATAAGGACACAAGCTTTAGTTTTTGCAGAGAACAAAGCTTCCCAGAGGGTCTTGGAAAAGGCAGGATTCCTTAGAGAGGGCATACTGAGAAAGTATTCTTATGTCAAGGGCATTGTTAAGGATGTGGCTATTTTTAGCCTTTTGTCAGAGGATACTCATTCTCCAGAGTAA | 1353 | 0.4464 | MAPVVDLSRISLRPFKLSDVDDFLLWAGDDQVTRNIRWKTCGSREEALDFIRDVCIPHPWRQSICLDDRSIGFVSADIGYAISAAYWGQGITTKALKIAVSQVFKDFPYLLRLQAFADVENKASQRVLEKAGFLKEVNLSRITLRPFKLTDVDNFMLMAGDDKVTCHTRWNTFFSRDQALTFIRDVCMPHPWNRSICIDDQTIGLCRAEIGYAIAAKYWGQGICTKAVKMAVSQVFKDFPDLIRIQAFVAAENKASQRVLEKVGFLREGILRKYSYVKGIGQSNLRPFKLTDVDDFMLMAGDDKVTCHTRWNTFVSRDQASTFIRDVCMPHPWNRSICIDDQTIGFISVSPGSGNERCRAEISYAIAAKYWGQGICTKAVKMAVSQVFKDFPDLIRTQALVFAENKASQRVLEKAGFLREGILRKYSYVKGIVKDVAIFSLLSEDTHSPE. | 451 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g05392 | 450 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 142 | 292 | IPR000182 | GO:0016747 | |
Seca2g05392 | 450 | Gene3D | - | 3 | 138 | - | - | |
Seca2g05392 | 450 | Gene3D | - | 283 | 445 | - | - | |
Seca2g05392 | 450 | Pfam | Acetyltransferase (GNAT) domain | 9 | 133 | IPR000182 | GO:0016747 | |
Seca2g05392 | 450 | Pfam | Acetyltransferase (GNAT) domain | 141 | 265 | IPR000182 | GO:0016747 | |
Seca2g05392 | 450 | Pfam | Acetyltransferase (GNAT) domain | 285 | 417 | IPR000182 | GO:0016747 | |
Seca2g05392 | 450 | PANTHER | ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN | 284 | 446 | - | - | |
Seca2g05392 | 450 | Gene3D | - | 139 | 282 | - | - | |
Seca2g05392 | 450 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 140 | 279 | IPR016181 | - | |
Seca2g05392 | 450 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 8 | 136 | IPR016181 | - | |
Seca2g05392 | 450 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 10 | 151 | IPR000182 | GO:0016747 | |
Seca2g05392 | 450 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 283 | 435 | IPR000182 | GO:0016747 | |
Seca2g05392 | 450 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 285 | 442 | IPR016181 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g05392 | Seca-Chr2 | 140488623 | 140502235 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Seca2g05392 | Acetyltransf_3 | 1.3e-19 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g05392 | - | - | spen:107011978 | 304.679 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca2g05392 | 2 | 140488623 | 140502235 | Seca2g05392 | 2 | 140488623 | 140502235 | ECH |