Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05379 ATGGCTGCTGATTTAAGTTACGCACTTTCAAAACTGCATATGCTAACCACTTCAGATTATGCCTCCGTAATCTCAATGAACCTATTTGTGGCTCTGCTATGTGCCTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGATGGGTGAATGAGTCTATCACTGCCCTTTTGATAGGTCTTTGTGTTGGCGTGGTCATTTTGTTGATTAGCCGCGGTAAAAGCTCGCATCTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCACCCATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAACTTCATGACCATCATGCTGTTTGGTGCTATTGGTACATTAATAAGTTGTAGCATCATAAGTTTCGGTGTCACACAAATTTTTAAGAGGATAGGTATTGGTTCACTGGATATAGGAGATTATCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTGTGCACATTACAGGTGCTAAACCAGGATGAGACACCTTTATTATACAGTCTTGTGTTTGGCGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCAAAAGTTTTGACCTTAACCAAATCGACCACAAAATTGCTTTGCATTTTATTGGCAACTTCTTGTATCTGTTTACAGCAAGCACCATGCTTGGGGTTTTGGCTGGTCTACTTAGTGCTTACATTATTAAAAAGCTATATATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTCATGATGTTAATGGCATACCTTTCCTACATTCTGGCCGAATTATGGTATCTGAGTGGCATCCTCACCGTATTCTTTTGTGGGATTGTTATGTCTCATTATACATGGCATAATGTGACTGAGAGCTCAAGAATCACTACAAAACACGCTTTTGCAACCCTGTCCTTTGTTGCTGAGACCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAGATTTGTTAGTGATAGGCCTGGAACATCCGTTGCTGTGAGTTCAGTATTATTGGCTCTAGTACTTGCTGGAAGAGCAGCATTCGTTTTCCCCTTATCCTTCATATCCAACCTTGCTAAAAAGTCACCAAATGAGAAAATAAGCATCAGGCAGCAGGTGATCATTTGGTGGGCTGGTCTAATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATCAGTTCACCATGTCAGGGCATACTCAACTGCGATCCAATGCTATCATGATCACCAGCACCATCACTGTTGTGCTTGTCAGCACAGTGGTGTTTGGTTTGATGACAAAGCCATTAATAAGGTACTTGCTGCCTCTTAATCCCCCTCCTCCGAAACGCAAGAACAGCTTGGCAAACATGGAATCATGTTCACCAAAATCAATCACTGTACCATTTCTTGGAGGTGCCCAAGATTCCGAAGCTGATGTGGATGGCAGTGAAATTCATCGTCCAAGCAGCATCCGTGACTTGCTAACCACTCCAACACACACTGTTCATCGCTTATGGCGTAAGTTTGATAATGCAGTTATGCGTCCAGTTTTTGGTGGCAGGGGTTTTGTTCCGGTAGAACCTAGCTCGCCAACTAAACGCACAGGCACAGGTCATAATCAGCGGCATTAA 1647 0.4226 MAADLSYALSKLHMLTTSDYASVISMNLFVALLCACIVIGHLLEENRWVNESITALLIGLCVGVVILLISRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCSIISFGVTQIFKRIGIGSLDIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNQIDHKIALHFIGNFLYLFTASTMLGVLAGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAETFIFLYVGMDALDIEKWRFVSDRPGTSVAVSSVLLALVLAGRAAFVFPLSFISNLAKKSPNEKISIRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRSNAIMITSTITVVLVSTVVFGLMTKPLIRYLLPLNPPPPKRKNSLANMESCSPKSITVPFLGGAQDSEADVDGSEIHRPSSIRDLLTTPTHTVHRLWRKFDNAVMRPVFGGRGFVPVEPSSPTKRTGTGHNQRH. 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05379 548 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca2g05379 548 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca2g05379 548 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca2g05379 548 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca2g05379 548 MobiDBLite consensus disorder prediction 526 548 - -
Seca2g05379 548 Gene3D - 146 197 - -
Seca2g05379 548 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca2g05379 548 PANTHER SODIUM/HYDROGEN EXCHANGER 13 523 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca2g05379 548 NCBIfam sodium/hydrogen exchanger 3 25 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05379 Seca-Chr2 140361503 140367030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05379 10 540 Antiporters AT3G05030 76.360 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05379 - - gmx:100787925 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05379 2 140361503 140367030 Seca2g05379 2 140361503 140367030 ECH
Seca2g05379 2 140361503 140367030 Seca2g05379 2 140361503 140367030 PCT