Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05371 ATGGAGTGCAACAAGGATGAAGCTCTGAGGGCGAAGCAAATTGCTGAAAATAGGATGCAAAGTGGTGACTTTGTAGGCGCACTGAAGTTTGCTACAAAAGCCAAAAAACTGTTTCCTGAGATTCAGAACATTACTCAGATCCTTACTGTTTGTGAGGTTCACTGTGCGGCACAGACCAAACTCTTTGGGTCTGAAATGGACTGGTATCAAATTCTTCAGGCTGATCGCTTTGCTGATGAAGTAACTATAAAGAAACAGTATAGGAAGCTTGCGCTGCTACTTCATCCTGATAAAAATAAATCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGGGGAAGCTAACAGATTCTTGAGTGACCAAACAAAGCGCCCTCAATATGACATGAGGATTAGAGGCCCTGTGGGAACTACAGTACCAAAGGTTCCATCCCATCACTCAAGTAGGAGTTCTTTTGGGGCAAAAGGTGATGTGAGTGTAAGAAATTATCAGAATAGTTTTCATTCACACTCCCATATGTGGAATTCCCATCAGCGGGCTGAACAGCAGACATTTTGGACATCATGCCCACATTGTAATACTAGGTACCAGTACTACAAAACCATTCTAAATGCTCCCTTGGACTGTCAACAATGCTCCAGGTCCTTCACAGCTCGTGATATGGGGTACCAGGGTGCATCAACAGGATATGCACGGTCATCATTTAATAACAATAAAGAGCCTTCAAAGCATGTCCCGCCAAAAGAAGCATCAAAAAGTAAAGGTGGAAAACCTGGTGGTAGAGGACTGGAAGATAAGTTTGTGCGGTCTTCTCCTGTATCTATGACAAAATGTGCTGCTGGAGTTGGTGTCAATCGTAAAGTAGAAAAGGGTAAAGATAGCCATGGGGGTACAGGAGTGACAAATGCTGGTGCTGGAACTTCCAACCCTGCTACATCCAAAGCCAAGGAATCACAGCCCTCAACAAAAGTTGGAAGTAAGAGAGCAAGGCAGTCAACATCTGATTTGAGAGATGATAACAATGCTAGAAATGGTAATGGCAAGAAAGATACAAATGTCCAAGAAAATGGTTTTGATACTTCTGGACTTCATGCACAAGTCCACTCTAGGAGATCTTCCAGGAAAAAGCAGCATGTTTCATACACAGAAGCTTCTGAAGATGGTAATTTTGAGAGTTCTTCCAAAAGGCCACGACAACATGAATCATTTGACCCCACTGAAGTAAAGAAAAGAGAAGTACCTGAAAATGGTGGGTTGTTCAATAGCAATAATCCAGCTAGTTTTGCAGCTGGTGTGGCTGGTCAAAATGGAGAGATGAGAAACAAAGCTAGTTCCCCACCTGAAGAAACGGTTTTAAGGAATAAAACGAAAAAGGAGCAGTCGAATGTGCAAAGAAAGGAGGCATCCGAGTCAGATCTTGATGATAGAAAATCAAAAGCTGACAATTGCTCTCCACTGGATTCAAATTTCCCTTCCAATTTAGAGATTTCCTGTCCTGATCCAGATTTCAGTGATTTTGAGAAGGACAGGGCAGAGGATTGTTTTTCTGTTAATCAATTCTGGGCTATTTTTGATACTACTGATAGTATGCCGAGATTTTATGCTCTTGTCAGGAAAGTGTACTCCCCATTCAAGTTGCAGATTACTTGGCTGGAACCTGACTCAGATGACCAAGGTGAGATTGATTGGCATGATGCAGGCTTGCCTGTTGGCTGTTGTAAATTCAGGCTTGGTCATTCTCAGAGAACTACAAATCGCGCTATGTTCTCTCACCAGATGCATTGCATGAAAGGAAGTGACAAAGGTTCTTATCTGGTGTATCCAAAGAAGGGAGAAACTTGGGCCATTTTCAGACATTGGAATATTGGGTGGAGTTCAGATCCAAAAAAGAATTCAGAATATCAATTTGAATATGTGGAAGTCCTATCTGATTTTGATGAGAATGTTGGCATTAAAGTTACTTATCTTGGAAAAGTGAAGGGGTTTGTTAGTCTCTTTCAGCAAACTGTGCAGAATGGAATTAGCTTATTTTGTGTTCCACCTAATGAGCTGTACAGGTTTTCACATCAGATTCCATCATATAAGATGACTGGTAATGAAAGGGAAGGTGTTCCAAAAGGATCTTTTGAACTTGATCCTGCTGGTCTCCCTAATAGTCTTTTTGAAGCTGGTGATTCTGGTGATGTGAAGATGGAGGGTGGAATGTTAAACAATGGAGTCAGTTGTTCCCATGAATCCTCTAAGTGTAAAGTTGAACAGTCAATGCCTAATGAGAGTATTCACAAAGCAAAGTTGCTAGAGAGTAATGGTGCTGAAATAGCTTCACCAATCCTTAGAAGATCCATGTGGTCAAATGGAAAAAGTTTGGACAATGGTCAAGCAAGCATTAGTCAATATATGGTCAGAGAGGATGACAAAGACATTGGCCACAGGGACTACAGTAAACCGGAGGGAATTGCTTCTACATGCCAGACTGAGAAAGTCAAGACACCACAGAAACATGAGAAAAATAACTATGACAGAGAGATATTGAAAGTTCGAAGATCTCCTAGAGATTTAAGCAAGAAAAATGATCTTGGAGATGCAGGTGAATGTACGACGGGTAAGTTGACTGATAATCATTCAAACGCCAACAGAAGTAAGGACAGCAGGTTTTATCAGTTGGTAGGAAGTGATCATGCACGTTTGAATAAAGTTTGCAGAGTTGTGGGAGCATCATGTTATGACTTTAAGAAGGAAAAATCTGAGATGTTTCAGTGTGATCAGATATGGGCAATATATGGTGTTAGGGATAAAAGGCCTGATATTTATGCTCAAATTAAGAAGATTGAATCCAGCCCTAATTTTAGATTGCATGTGTCTGAACTTGAACCCTGTTCTCCACCAAAAGGCTTAAAAAGAACAATAGCTTGTGGTACCTTCAAAGTTAAGAAAACCAAATCGCAGATTCTTTCTCTTTCTTCATTCTCTCATCAACTAAAAGTTGAACCCGTGGCAAATGATAAATATGAAATTTACCCTCGAAAAGGTGAGATTTGGGCTCTATACAAGGACCAGACCTATGAACTAACTTCTTCAAACCAGGGCAGAGATGAATGTCATATAGTGGAAGTATTAGCAGTTACTGACAGGAGCATCCAAGTTGTTGTTCTGATGCCCCTTAGCAGCTCTCAGCCAATTTTCAAGGCTCCTAGAATCCAGCGATCTAAGACTGGTATAATTGAAATATTAAAAGAAGAGGTTGGTAGATTTTCGCATCAGATTCCTGCTTTTCAGCACAGTGGGGAAGACAATGCTAGTCTCAGAGGGTGTTGGGTGCTTGATCCTTCTTCAGTTCCTGGTTTTGTCATACAAGTAGACTGA 3363 0.4109 MECNKDEALRAKQIAENRMQSGDFVGALKFATKAKKLFPEIQNITQILTVCEVHCAAQTKLFGSEMDWYQILQADRFADEVTIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRFLSDQTKRPQYDMRIRGPVGTTVPKVPSHHSSRSSFGAKGDVSVRNYQNSFHSHSHMWNSHQRAEQQTFWTSCPHCNTRYQYYKTILNAPLDCQQCSRSFTARDMGYQGASTGYARSSFNNNKEPSKHVPPKEASKSKGGKPGGRGLEDKFVRSSPVSMTKCAAGVGVNRKVEKGKDSHGGTGVTNAGAGTSNPATSKAKESQPSTKVGSKRARQSTSDLRDDNNARNGNGKKDTNVQENGFDTSGLHAQVHSRRSSRKKQHVSYTEASEDGNFESSSKRPRQHESFDPTEVKKREVPENGGLFNSNNPASFAAGVAGQNGEMRNKASSPPEETVLRNKTKKEQSNVQRKEASESDLDDRKSKADNCSPLDSNFPSNLEISCPDPDFSDFEKDRAEDCFSVNQFWAIFDTTDSMPRFYALVRKVYSPFKLQITWLEPDSDDQGEIDWHDAGLPVGCCKFRLGHSQRTTNRAMFSHQMHCMKGSDKGSYLVYPKKGETWAIFRHWNIGWSSDPKKNSEYQFEYVEVLSDFDENVGIKVTYLGKVKGFVSLFQQTVQNGISLFCVPPNELYRFSHQIPSYKMTGNEREGVPKGSFELDPAGLPNSLFEAGDSGDVKMEGGMLNNGVSCSHESSKCKVEQSMPNESIHKAKLLESNGAEIASPILRRSMWSNGKSLDNGQASISQYMVREDDKDIGHRDYSKPEGIASTCQTEKVKTPQKHEKNNYDREILKVRRSPRDLSKKNDLGDAGECTTGKLTDNHSNANRSKDSRFYQLVGSDHARLNKVCRVVGASCYDFKKEKSEMFQCDQIWAIYGVRDKRPDIYAQIKKIESSPNFRLHVSELEPCSPPKGLKRTIACGTFKVKKTKSQILSLSSFSHQLKVEPVANDKYEIYPRKGEIWALYKDQTYELTSSNQGRDECHIVEVLAVTDRSIQVVVLMPLSSSQPIFKAPRIQRSKTGIIEILKEEVGRFSHQIPAFQHSGEDNASLRGCWVLDPSSVPGFVIQVD. 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05371 1120 MobiDBLite consensus disorder prediction 851 878 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 451 482 - -
Seca2g05371 1120 Pfam Domain of unknown function (DUF3444) 494 700 IPR024593 -
Seca2g05371 1120 Pfam Domain of unknown function (DUF3444) 905 1096 IPR024593 -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 286 487 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 389 414 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 300 329 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 131 155 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 141 155 - -
Seca2g05371 1120 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Seca2g05371 1120 SMART dnaj_3 66 123 IPR001623 -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 242 264 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 330 345 - -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 229 270 - -
Seca2g05371 1120 CDD DnaJ 67 120 IPR001623 -
Seca2g05371 1120 Gene3D DnaJ domain 64 183 IPR036869 -
Seca2g05371 1120 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1113 - -
Seca2g05371 1120 PRINTS DnaJ domain signature 87 102 IPR001623 -
Seca2g05371 1120 PRINTS DnaJ domain signature 103 123 IPR001623 -
Seca2g05371 1120 PRINTS DnaJ domain signature 69 87 IPR001623 -
Seca2g05371 1120 Pfam DnaJ domain 67 128 IPR001623 -
Seca2g05371 1120 MobiDBLite consensus disorder prediction 346 367 - -
Seca2g05371 1120 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05371 Seca-Chr2 140297050 140300412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05371 4 263 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.931 2.77e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05371 - - aprc:113861153 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05371 2 140297050 140300412 Seca2g05371 2 140297050 140300412 ECH