Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05354 ATGCCTACTTTTCTGAAGCAGGGCCCTAGTATACTAGAATGTGATGAACAGAAGAAGGGGCTGCTTCCAAGAGTTGTAGAAGGTCTTTTTGATTCCTTAAACCCTTCGGGTGAAGACATGACATACTCCATCAAACTGTCAATGGTTGAAATCTATATGGAGAAAGTAAGGGACCTTTTTGATTTATCAAAAGACAATATACAAATTAAGGAGAGCAAATCACGAGGAATATATTTACCTGCTGTTACAGAGATCACTGTACTGGATCCTGCCGAAGCATTGCAAAGCCTATCTAGGGGGATAGCTAACCGTGCAGTTGGAGAGACCCAAATGAACGTGGGCAGCAGCAGAAGTCATTGTATTTATATATTCGCAATTCAGCAAGAGTTTTCTAGAGATAAAAGGATGAGGTCCGGAAAACTAATTCTTGTGGACTTGGCTGGGTCAGAGAAAGTGGAGAAAACAGGTGCTGAGGGAAGAGTTCTAGAAGAAGCTAAAACCATAAACAAATCCTTGTCTGCTCTGGGGAATGTAATAAATTCTCTTACATGTGGTTTGCAAGGAAAAGCAAGCCATATCCCTTATCGTGATTCCAAGCTCACTCGAATTCTTCAGGATGCACTTGGAGGAAATGCTAGAACTGCATTACTCTGTTGTTGCTCTCCCAGTGCTTTTAATGCATCAGAGAGTCTGTCCACTCTTCGTTTTGGTGCAAGGGCGAAACATATAAAGGCGTCACCTCGTGTCAATTGCAGTGAAGAAAAATGTGAGACGGCTTCCATTGCTTCTTCTCCACCTGGTGACGAGTCATCTACTAGAATTTTGAACAAGTTGAGGGAAAGATTGAATGTTGAAGATGTGAAGTTGCTGGAGGAATTGTTCACACAAGAGGGCATTCTGTTTGATCCTCCATCAGTTGAAGAGGAGTCAGAAATAGAAGATCTTACCTTACAGACTATATCCTCACTACAAGAAGCCTTGGAAAAGCTCATATCTACTGTTGGTGAGCTTAAAAATGAGAACAGCATTCTCAGGGCCAAAGTTGATGCTTCGACGAATAGCTCGATTTTTCAAACTAATGATAGCTCCTTGTGTTCTTGGTTGTTGATTGCAGTGGATGCAATGGACTTGCCATTCCTAAATGCCTATTTGGATTCAGTGGGTTTGCCAAATTTTAGGAAAGGTTGCAACTTTGCAGCAGCAGGTTCAACTATTCTTCCAGCCACTGCATCATCCATCTGCCCCTTCTCCTTTGGGATCCAAGTGTCTCAGTTCCTCCGATTTAAAGCTCGGGCTCTTGAATTGCTTGCAAAAGGTAGGAAATTTGATAAGTATGTCCCAAATGAAGATATTTTCGAGAAGGGGTTGTACATGTTTGACATTGGCCAGAATGATCTTGCTGGTGCATTTTATTCAAAAACATTAGACCAGATACTTGCTTCAATTCCAACAATTCTTTTAGAATTTGAAACTGGAATAAAGAAACTTTATGATGAAGGAGCTAGATATTTCTGGATACACAATACAGGTCCTCTTGGATGCTTACCTCAGAATGTTGCCAAATTTGGAACTGATCCATCAAAGCTTGATGAACTAGGATGTGTTAGTGCACACAACCAAGCTGCTAAAACCTTTAATCTACAGCTTCATGCTCTCTGTAGTAAATTGCAGGGCCAATATCCAGATGCAAATGTCACATTCGTTGATATCTTCACCATAAAATCAAACCTCATTGCTAACTGTTCTAGATACGGGTTTGAACAACCTATTATGGCTTGTTGTGGATATGGAGGTCCACCACTGAACTATGACAGTCGAGTTACTTGTGGGCAAACAAAGACCTTGAATGGAACCACAATTACAGCAAAAGCTTGTGCTGATAGCAGTGAGTATATAAACTGGGATGGGATTCATTACACTGAGACTGCAAATCAATATGTTGCATCACAGATTCTCACTGGAAAGTACTCTGATCCTCCTTTCTCAGACAAAATGCCATTCCTTCTCAAGCTCAAGTTCTAA 2022 0.41 MPTFLKQGPSILECDEQKKGLLPRVVEGLFDSLNPSGEDMTYSIKLSMVEIYMEKVRDLFDLSKDNIQIKESKSRGIYLPAVTEITVLDPAEALQSLSRGIANRAVGETQMNVGSSRSHCIYIFAIQQEFSRDKRMRSGKLILVDLAGSEKVEKTGAEGRVLEEAKTINKSLSALGNVINSLTCGLQGKASHIPYRDSKLTRILQDALGGNARTALLCCCSPSAFNASESLSTLRFGARAKHIKASPRVNCSEEKCETASIASSPPGDESSTRILNKLRERLNVEDVKLLEELFTQEGILFDPPSVEEESEIEDLTLQTISSLQEALEKLISTVGELKNENSILRAKVDASTNSSIFQTNDSSLCSWLLIAVDAMDLPFLNAYLDSVGLPNFRKGCNFAAAGSTILPATASSICPFSFGIQVSQFLRFKARALELLAKGRKFDKYVPNEDIFEKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILLEFETGIKKLYDEGARYFWIHNTGPLGCLPQNVAKFGTDPSKLDELGCVSAHNQAAKTFNLQLHALCSKLQGQYPDANVTFVDIFTIKSNLIANCSRYGFEQPIMACCGYGGPPLNYDSRVTCGQTKTLNGTTITAKACADSSEYINWDGIHYTETANQYVASQILTGKYSDPPFSDKMPFLLKLKF. 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05354 673 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 15 350 IPR027640 GO:0003777|GO:0007018
Seca2g05354 673 FunFam Kinesin-like protein 86 245 - -
Seca2g05354 673 CDD SGNH_plant_lipase_like 370 654 IPR035669 -
Seca2g05354 673 ProSiteProfiles Kinesin motor domain profile. 1 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05354 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 250 IPR027417 -
Seca2g05354 673 PRINTS Kinesin heavy chain signature 140 158 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05354 673 PRINTS Kinesin heavy chain signature 193 214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05354 673 PRINTS Kinesin heavy chain signature 109 126 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05354 673 Gene3D SGNH hydrolase 341 655 IPR036514 -
Seca2g05354 673 SMART kinesin_4 1 251 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05354 673 Pfam GDSL-like Lipase/Acylhydrolase 384 651 IPR001087 GO:0016788
Seca2g05354 673 Gene3D Kinesin motor domain 3 263 IPR036961 -
Seca2g05354 673 Coils Coil 320 347 - -
Seca2g05354 673 Pfam Kinesin motor domain 15 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05354 673 ProSitePatterns Kinesin motor domain signature. 139 150 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05354 Seca-Chr2 140040897 140052900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05354 16 252 Calmodulin-binding Proteins AT5G65930 38.333 2.05e-38 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05354 - - cic:CICLE_v10000365mg 730.709