Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05343 ATGGCCTTCATACCAATTCCCTCCTCTTTCAAAACCTCACAACTCTTACTCTCACTCATCATCTTCCTCGTCCTCATCTTCTTCTTCATAAACCTACCTTCCTCTCCCTCTCTCTTCTCTCCCCCGATTCCCACTCGTAGGTCACTCCTCAGCATCACATCTTGCTCCTCCAACTCCAACACACCCGAATCCAATGGCCTCCTCAACTACCACTGCATTTTCCCTCAAAACCACTTCCTCTCCATCCCCACTCTCTCCCTTCTCCTTCTTCTCCATTTCTACATACTCATCAAAACAGCTCAGCACCACTTCTCCGTCGTCACCACCAAACTCGCTTATCACCTCAATCTCTCTCCCAGCATGGCCGCCGTCACCCTCCTTGCCCTAGGTAACGGTTCTCCCGATGTCTTCTCTTCCCTCGCCGCTCTCCGCGCCGGTCAATACCGAACCGGCTTCGGCGCCATACTCTCCGCCGGAGCCTTCGTCTCTGCTCTCGTCGTAGGCTTCGTCGCGATCTACGCCGCGCCTTTTCCCGTCGATCCCGCGCCTTTCGTAAGAGATGTCTTGTTCTACTTGACCGCCGCTTTGTTCCTCTTCTACGTCTATCTTAGTGCTGAGATTTTTCTATGGCAAGCGCTTGGATTCGTTGGATTCTACATCTTCTTCGTAGGATTTGTGTTCTATATGGATTTAGGGATGCCGGATCGCAGGGAAAAGAGTTCTGTGGATCTTGAGGGACAAGAGGAATCGGATTTCGCCGTCAAAGCTGCGGAATCTCCCCAGGAAGACAAACGCACTTCTGGATTTTTAATACATGAAAGACGTGCTAAACTAATTCAATTGACCATTGAGATAATCGATGCTACCATGATCATTAACTGTTTAATTTCAATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCTTAAGATTGACAATCCCTCAACCAGCACCATCGCAATGGAGCAGATTTTATGCATCAGCCAATATCGCTCTTTGTCCGCTAGCCCTCTTGTATGCCTGCAACTCATTCATGCCATTTGATCATCCCATAGTTTTCCTCCTCCCCAACACCCATTTCCCCCTCTGGTCAGTGGTGCTCATGACAAGCTTCTCTCTTGCATTTCTTCATCTTGTTATGGAAAAAGAACCCCCGAAAACAGAGCATCTGCCTGTGGTGGTTGTGGCATTTGTTATGAGCGTGTTTTGGATATCTACAACCGCCGGAGAACTGGTGAATTGCCTTGAAGCTCTAGGTACACTGCTCAAACTGCCACAAGCACTCCTAGGTCTTACAGTGCTGGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCAGCAATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTTGGTCTTGGATCTGCTTTGGTCATACAGACGGCCAATGTATATCCTAGAGCCTATCAGCTTAATTTCCACGTTGGTATTGTGATCGCATTTGTTTTCTTGCTTTTAAGCCTCATGGGGTCTCTCTTGGTGATCACTTGGTGCAGATTCCGAGTCCCTAGGTTTTGGGGATTCTGTCTGGTAGGCCTCTATATAGCTTTTATGGCAGCAAGTTTGCTAATAGCCATGTTTTCGGGGTGA 1656 0.4825 MAFIPIPSSFKTSQLLLSLIIFLVLIFFFINLPSSPSLFSPPIPTRRSLLSITSCSSNSNTPESNGLLNYHCIFPQNHFLSIPTLSLLLLLHFYILIKTAQHHFSVVTTKLAYHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAALFLFYVYLSAEIFLWQALGFVGFYIFFVGFVFYMDLGMPDRREKSSVDLEGQEESDFAVKAAESPQEDKRTSGFLIHERRAKLIQLTIEIIDATMIINCLISISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPFDHPIVFLLPNTHFPLWSVVLMTSFSLAFLHLVMEKEPPKTEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLPQALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANVYPRAYQLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYIAFMAASLLIAMFSG. 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05343 551 Gene3D - 327 544 IPR044880 -
Seca2g05343 551 Gene3D - 117 245 IPR044880 -
Seca2g05343 551 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 63 549 - -
Seca2g05343 551 Pfam Sodium/calcium exchanger protein 394 544 IPR004837 GO:0016020|GO:0055085
Seca2g05343 551 Pfam Sodium/calcium exchanger protein 86 227 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05343 Seca-Chr2 139920169 139923375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05343 8 550 Antiporters AT1G08960 66.964 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05343 K13754 - gmx:100775437 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05343 2 139920169 139923375 Seca2g05343 2 139920169 139923375 ECH