Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05327 ATGACGTGTTTCTCTGCAGATCAAATAATTGAAATGCTCACTGAACAATTTAATCGATTCGTCATTCACTGCAATTTGAAGATACCATCAGATAATGCATCAGTGCAATTGAATGAGACTTCTAAAGACATGGATGAGAATAGTATGTCCAATGGAATCCATGAACTTTCTCCTGATCAGGGTCATACACTCCCAATATTAAAGAAAGTCCTTGACTTGAGTACCAAAGTTCAGAATTTGAAGAAACAACATGTAGCCCTATCTAATCAAGTGAAACTCACAACTGAGTCATTTCCAGACCTAGATGTTTTGAAGTCTGTTAAGCTTCTGGGTGCTGAATATGAACTATTGAAAAGAAAGTATCTGGAGGAGTCCTTTCAACGTAGGAGGCTTTACAATGAAGTGATTGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATGAAAGTGAAATTGCAAATGGATCAACAGTCAATTTCGAGTCATCTGCTGAGGAGCTTCAAGTCATTTGCCCTGATTCTTCTAAAAAGCAATTTAAGTTTGATCATGTATTCAGACCTGAGGATAACCAAGAGGCTGTTTTCACACAAACAAAACCTATTGTTACATCCGTATTAGATGGATTTAATGTTTGCATTTTTGCATATGGCCAAACTGGAACTGGAAAGACTTTTACCATGGAGGGAACCCCAGAGCATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGGATATCTGAAGAGAGACAAGGCATCGTAAAATATGAATTGCTTGTTAGCATGTTGGAGGTTTACAACGAGAAGATAAGGGATCTCTTGGCGGAAAATTCTACAGAACCTACCAAGAAGTTGGAGATAAAGCAATCTGCAGATGGAACCCAAGAAGTCCCAGGTCTTGTTGAAGCTCGTGTTTATGGAACAGAGGATGTTTGGGAAATGTTGAAGTCTGGGAACCGAGTCAGATCCGTTGGATCCACTAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGCGAGTAACTGTTATTGGGGAGAATTTGATCAATGGCCAGAGAACAAGGAGTCACCTATGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTTGGGAAAACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAGTTCATAAATAAGTCTCTATCAGCACTTGGTGATGTTATTTCAGCTCTTGCGTCCAAATCAGCCCATATACCTTACAGGAACTCGAAGCTCACTCATATACTCCAGAGCTCTTTAGGTGGAGATTGCAAAACTTTAATGTTTGTCCAGATAAGTCCAAGTAAAGCAGACATGACAGAGACACTTTGTTCACTGAATTTTGCCACGCGTGTACGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAGCTGACCTCACTGAGCTGTTTAAGTACAAGCAAATGGCAGAAAAGCTCAAACACGATGAGAAGGAAACTAAGATATTACAAGATAATTTGCAGACAGTGCAAATGAGACTAGCTGCAAGGGAAATAATGTGCCGAAATCTTCAAGAAAAGGTTCGGGACCTTGAGAACCAGATAGCAGAGGAGAGAAAAATCAGACTGAAGCAAGAAAGTAGGTCACTTGCCGCTGTTTCAGCTCAACCTTCAACAGTGTCATCATCAAAACACACAACAGCGGAGAAATCCATAAAAAAGCCACCACTGAATCCTTCAAAAAGGCCTCCACTTAGAAGAATTACTAATTTCTTGCCTCCACCATCTGAGAGAAGGCCCTCATGCAGCTCTTCCATGGATGGAAAGGAAAACACTGGCAGAACAACCTCAATGACAGAAGGCCTAGCGAAATCAAGAAGAAGGGGAACAATTGCTATGAGACCACCACCTGCACCATCAAAAACACAGGTCCTTCAGCCTAGAAGACGAGTTTCCATAGCTACTTTCCATTCTGACACAACTTCTGACATGCCAACACAGGTTCTTCAGCCTAGAAGGAGAGTGTCCATAGCTACACTCCGTTCTGACACAACTTCTGACATGGCAACTCCTCTACGTACCTCTACCTCTACCTCTCAATCCAGTGATGGAAGCATTGTTCAGCAATCAATAAGGAACCAAAGGAAAGCAAGGTATTCAAGGTTGTTCACCCCAATGCCAACGACATCAGTTGAGACATCGCCAACTGTGATGAAAAGCAGCAGTAAATTTGCGGGCAGTCCAACACAGGCAGATTCACGAATGGCTACTAGGCATCCAACTGTCCTTGCACTGCAACGCAAATCTTTAATATGGAGTCCTCTCAAGCTGAGAGGCCTCAAAAATAGTACCAGAAGGTCATTATCACTCTTGCCATCTCGGCCTTCCACTTCCACCGAAATGCAATGA 2388 0.4242 MTCFSADQIIEMLTEQFNRFVIHCNLKIPSDNASVQLNETSKDMDENSMSNGIHELSPDQGHTLPILKKVLDLSTKVQNLKKQHVALSNQVKLTTESFPDLDVLKSVKLLGAEYELLKRKYLEESFQRRRLYNEVIELKGNIRVFCRCRPLNESEIANGSTVNFESSAEELQVICPDSSKKQFKFDHVFRPEDNQEAVFTQTKPIVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRISEERQGIVKYELLVSMLEVYNEKIRDLLAENSTEPTKKLEIKQSADGTQEVPGLVEARVYGTEDVWEMLKSGNRVRSVGSTSANELSSRSHCLLRVTVIGENLINGQRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSKADMTETLCSLNFATRVRGIESGPARKQADLTELFKYKQMAEKLKHDEKETKILQDNLQTVQMRLAAREIMCRNLQEKVRDLENQIAEERKIRLKQESRSLAAVSAQPSTVSSSKHTTAEKSIKKPPLNPSKRPPLRRITNFLPPPSERRPSCSSSMDGKENTGRTTSMTEGLAKSRRRGTIAMRPPPAPSKTQVLQPRRRVSIATFHSDTTSDMPTQVLQPRRRVSIATLRSDTTSDMATPLRTSTSTSQSSDGSIVQQSIRNQRKARYSRLFTPMPTTSVETSPTVMKSSSKFAGSPTQADSRMATRHPTVLALQRKSLIWSPLKLRGLKNSTRRSLSLLPSRPSTSTEMQ. 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05327 795 ProSiteProfiles Kinesin motor domain profile. 141 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 ProSitePatterns Kinesin motor domain signature. 362 373 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca2g05327 795 MobiDBLite consensus disorder prediction 540 640 - -
Seca2g05327 795 Coils Coil 479 499 - -
Seca2g05327 795 FunFam Kinesin-like protein 136 502 - -
Seca2g05327 795 MobiDBLite consensus disorder prediction 589 616 - -
Seca2g05327 795 SMART kinesin_4 139 470 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 MobiDBLite consensus disorder prediction 672 707 - -
Seca2g05327 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 498 IPR027417 -
Seca2g05327 795 MobiDBLite consensus disorder prediction 719 748 - -
Seca2g05327 795 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 617 IPR027640 GO:0003777|GO:0007018
Seca2g05327 795 Gene3D Kinesin motor domain 136 505 IPR036961 -
Seca2g05327 795 Coils Coil 70 90 - -
Seca2g05327 795 PRINTS Kinesin heavy chain signature 212 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 PRINTS Kinesin heavy chain signature 332 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 PRINTS Kinesin heavy chain signature 412 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 PRINTS Kinesin heavy chain signature 363 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 MobiDBLite consensus disorder prediction 542 559 - -
Seca2g05327 795 Pfam Kinesin motor domain 147 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca2g05327 795 Coils Coil 507 541 - -
Seca2g05327 795 CDD KISc_C_terminal 139 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05327 Seca-Chr2 139836262 139840811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g05327 107 468 Calmodulin-binding Proteins AT5G65930 43.407 1.22e-79 277